Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1841 ATGGGTTTATCTTCTTTGCACGTCTGCATGGATTCATCAGATCATTGGTTGCAGGGCACAATTCACGAGGAGTCTGGAATGGATTCTTCTTCTTCACCCTCTGGGGACATGCTTACATGCTCAAGGCCCATGCTAGAGAGGAGGCTAAGACCCCCTCATGACCAAGCTCTAAAGTGCCCCAGGTGTGAGTCAACCCACACCAAGTTCTGCTACTACAACAACTACAGTCTCTCTCAGCCAAGGTACTTCTGCAAGACCTGCAGAAGGTACTGGACCAAAGGAGGCACTCTTAGGAACATTCCTGTTGGTGGAGGGTGCAGAAAGAACAAGAAAGTCTCTGCCAAAAAATCCAATGACCACCAATTAGTTAACAATCAAATTAGCCAAACACAACCCCCACCCTACCATCACAACTCCAAGGACCTTCAACTCTCTTTTCCAGATGTACAATTTTCCCACCTCAGCAACTTGCTTGGGAGCAATGCAGGGGCACTGGGAAACCCTAGCTTCATGGAGGGCAAGTATGGTATTGGCATGATTGAGAACCCTAGGCCAATTGACTTCATGATGGAGAGCAAGTTGGAGGGCATAATTGGGAGTAGTAGTTCTAGGAATTTTGATTTTTTTGGAAATAGTGATATGGGTATGGGTGGTGGGCTAGGAGATATGAATGGTACTGCTCAAAATGGGTTGCCACCAAATTTTCATGGTCTTTGCTCCCCAGCCTTTGGTGGCATGTCTATGTCCCTTGACGGCAACAACACCAGCAATGGTGCTAATAACTACTTAATGGACTCTTGCCAACGCTTGATGCTGCCTTATGATGCCAATGAGGACCATAATGCCTCAATGGATGTGAAGCCAAACCCTAAGCAACTATTGTCCCTCGAATGGCAAGACCAGGGTTGCTCTGATGCAGGCAAAGACTCATTTGGATATCTGAACGGTCCAGGATCATGGACTGGCATGATGAACGGCTATGGATCTTCCACCACAAACCCTTTGGTCTAA 1011 0.4708 MGLSSLHVCMDSSDHWLQGTIHEESGMDSSSSPSGDMLTCSRPMLERRLRPPHDQALKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSAKKSNDHQLVNNQISQTQPPPYHHNSKDLQLSFPDVQFSHLSNLLGSNAGALGNPSFMEGKYGIGMIENPRPIDFMMESKLEGIIGSSSSRNFDFFGNSDMGMGGGLGDMNGTAQNGLPPNFHGLCSPAFGGMSMSLDGNNTSNGANNYLMDSCQRLMLPYDANEDHNASMDVKPNPKQLLSLEWQDQGCSDAGKDSFGYLNGPGSWTGMMNGYGSSTTNPLV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1841 336 PANTHER - 12 330 - -
Pvu9g1841 336 Pfam Dof domain, zinc finger 54 111 IPR003851 GO:0003677|GO:0006355
Pvu9g1841 336 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Pvu9g1841 336 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 330 IPR045174 GO:0003700|GO:0006355
Pvu9g1841 336 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1841 Pvu-Chr9 26082689 26084869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1841 1 336 C2C2-Dof Transcription Factor Family AT5G62940 40.863 1.97e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pvu9g1841 zf-Dof 2.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1841 - - gmx:778107 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2072 3 41410491 41412765 Pvu9g1841 9 26082689 26084869 PCT