Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1070 ATGCAAAAGGAAAAGGAAGCCATTATCAAGGAGGGAACGGATACAGAAATGGAAGGAAGTCTTCCAAAAGAAGAAACCCTACCACCGGGATTTCGATTTCATCCTACCGATGAAGAACTTGTCACTTGCTATCTCCTAAATAAGATATCGGATTCTAATTTTACAGGCAGAGCAATAACTGATGTAGATCTCAACAAAAGTGAGCCATGGGAGCTTCCAGGGAAAGCTAAGATGGGTGAAAAAGAATGGTACTTCTTCAGTCTGAGAGACCGTAAATACCCAACTGGTGTGAGAACCAATCGAGCAACGAACACGGGGTATTGGAAGACAACAGGGAAAGACAAGGAGATCCTCAACAGTGCAACCTCTGAATTGATTGGCATGAAGAAGACTTTGGTTTTCTACAAAGGAAGAGCACCCAGAGGAGAGAAAAGCAACTGGGTCATGCATGAATACCGTATGCACTCAAAACCCACCTTCAGAACTACCAGGGATGAATGGGTGGTTTGCAGGGTGTTCAAGAAGAGTGGCGGGGCAAAAAAGTTCCCTTCTTCCAACCATGCAAGAGCAGTGAATCCGTACAGCTTGGAAATAGGGCCAAATATTATGCCACCACCATTGATGCAATTGGGAGATCCTTCTGCTCATTTCCTTTATGGACGGAACTACATGAGCAGTGTTGAGTTAGGTGAACTTGCAAGGGTTTTAAGAGGAGGTGGATCAACAAGTAGTGTCAATCAACCAATGCAATCCCAATTGGGCTACCCTACATCAGCAGCAGCAGCAGGAGGAGGAGGAGGATTCACCATTTCAGGACTCAATTTGAATCTGGGAGGAGGAGGAGGAGCAACAAGCACAACACAACCCATTTTTCGACCAATGCAACCTTCTTCTGCTGCTCCTGTTCATACAATGGCTCAAGTAGTTGATGTGAATTCCAGCATGATGACAAGTGGTTCTCTTGGTGCAGATGTAGGTTATGGATCAGAATTGAGTAACATGAATTCTCATGGGAATAGGTTTATGGGAATGGAGCATTGCATGGATCTAGACAACTATTGGCCTTCCTACTAA 1074 0.446 MQKEKEAIIKEGTDTEMEGSLPKEETLPPGFRFHPTDEELVTCYLLNKISDSNFTGRAITDVDLNKSEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSATSELIGMKKTLVFYKGRAPRGEKSNWVMHEYRMHSKPTFRTTRDEWVVCRVFKKSGGAKKFPSSNHARAVNPYSLEIGPNIMPPPLMQLGDPSAHFLYGRNYMSSVELGELARVLRGGGSTSSVNQPMQSQLGYPTSAAAAGGGGGFTISGLNLNLGGGGGATSTTQPIFRPMQPSSAAPVHTMAQVVDVNSSMMTSGSLGADVGYGSELSNMNSHGNRFMGMEHCMDLDNYWPSY* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1070 357 MobiDBLite consensus disorder prediction 1 30 - -
Pvu9g1070 357 Gene3D NAC domain 36 178 IPR036093 GO:0003677|GO:0006355
Pvu9g1070 357 MobiDBLite consensus disorder prediction 1 21 - -
Pvu9g1070 357 Pfam No apical meristem (NAM) protein 28 154 IPR003441 GO:0003677|GO:0006355
Pvu9g1070 357 SUPERFAMILY NAC domain 24 175 IPR036093 GO:0003677|GO:0006355
Pvu9g1070 357 ProSiteProfiles NAC domain profile. 27 175 IPR003441 GO:0003677|GO:0006355
Pvu9g1070 357 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 354 - -
Pvu9g1070 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1070 Pvu-Chr9 15742889 15745067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1070 23 357 NAC Transcription Factor Family AT2G24430 51.541 5.30e-110 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu9g1070 NAM 4.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1070 - - gmx:100805060 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0615 1 7192292 7195412 Pvu9g1070 9 15742889 15745067 PCT