Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0738 ATGTTGTGCGCTTGTTCTTCCGGTGAGCAGTTCAAATTTGAAGAGCCGCCGCAGTCGCCGGACTCCCTCGCCACCAGGGATTTCTCCGCTAGCGGGCTCTCTTCCAGGACCACCGGGGAATGGGAACCTAAATTCGATGAAGCGCAAGTAGAACAAGCTGAATCTACGCTTAAAGAAGCTCTTTCCTTAAACTATGAGGAGGCTAGGGCTTTGTTGGGGAGACTTGAATACCAAAGAGGGAATTTCGATGCTGCACTTCAAGTGTTTCAGGGTATAGACATCAAGGGTTTGACCCTGAGAATGATCAAGGCTATTGCTGAAAGAACCAAGCAGAGGAAACCACGTTCCAAGGCAGATATCGTTGTTTCAAATGTGATGTCATTGCACTCTGTTAGCCTGCTTCTTGAGGCAATTTTGCTTAAAGCAAGGTCATTGGAGGAGCTTGGGGAATGCATTGAGGCTGCAAAGGAGTGCAGAATAATTCTTGATACAGTTGAATCTGCCCTTCCTAATGGAATACCTGAGGGTATTGGCGAAGATTGTAAGTTGAAAGAGATGTTTCATAAAGCTTTGGAATTACTTCCAAGGCTTTGGATCAAAGCAGGATTTCTGGATGAAGCTGTAGCTGCGTATCGTCGTGCTCTGGTCAAGCCATGGAGTTTGGAGCCACAAAGGTTGGCTGCTGTACAAAAAGATTTAGCTACGACACTACTCTATGGCGGTGTTGAAGTTAGCCTATCCTCTCAGTTGCAGGTGTGGGGTGAGACAACACCTACCAACAGTGTTGAAGAAGCGATACATTTGCTAGTAATACTCATGAGCAAGGTGGCAATTGGGGAAATAGACTGGGATGCTGAAATAATGGATCATCTTACGTTTGCACTTTCAGTCACTGGGATGTTTGAGCTACTTGCAGATCATGTAGAGCAGATCCTTCCAGGTATCTATAGTCGGGCTGAGAGGTGGTACTTTCTTGCTCTGTGTTTTAGTGCAGCAGGACATGATGAGGTGGCATTGAACCTTTTAAGGAAGGCTTGCGGGAGTTCTGAAGCAAACCATAAACCCCATTTTCCTTCATTTTTGCTTGGAGCAAAACTCTGTTCCCTAGATTCTCGCCATGCTCATGAAGGCATTAACTTTTCACGTAAAGTTATTGAGCTAGCTAAGCATCAAAATGAGCATTTTCTGGGTCAAGGCCATACATTTCTTGGAATCTGCTATGGTGCTGCCGCCAGAATTTCTGTACTGGATTCTGAAAGAAGTATATTTGAAAGAGAGTCTTTGGACTCTCTAAACTGTGCTGCTGTAAATGGAAATGATGACCTGGAAGCAATATTCAGCCTTGGACTGGAAAATGCAATTCAAAGGAATCTGGATGCAGCTTACAACAACATAATGATGTTCTCAGACATGACTGTTGGCAGTTCGAGAGGTTGGCAGCTGTTAGCACTTATAGTATCTGGACAGCATCGGTTTAAGGATGCAGAAACTATAGTTGATTTTGCTTTAGATGAGGCCGGGGGGATGGATCAACTTGATCTTCTGAGATTGAAAGCTATACTTCAAATTGCTCAACAGCAACCCAGGCAAGCAATAGAAACATATAGGATCTTGCTTGCACTAATTCAAGCAAAAAAGGAACTTTGGCTTCAAGATAACATTAATCGAGAACAAGCATGCAGGCAAGAGGCATTAACAGAAAGGAAGTTGGAAATGGAAGCCTGGCAGGATTTGGCTACAATTTATACAGATATCGGTTCCTTGATCGATGCAAAAACTTGTGTTGACAAGGCCCAATTGATAGAGTTTTTTTCTCCAAGAAGTTGGCATATTACAGGGTTGATGCTTGAAGCTCAATCATTATACAGAGAGGCATTTATTTCCTTTTCAATATCATTGTCAGTAGAACCAGATTACGTTCCCAGTATCATTTCTACTGCAGAATTGTTGACGAAACTTGGTATGCAATCACTTCCAATTGCAAGAAGTTTTTTAATGAATGCTTTACGATTAGAACCTACAAACCACGATGCTTGGTTCAACCTTGGATTGGTTTCAAAAATGGAAGGTTCATTACAGCAAGCAGCAGAGTTCTTTCAAGCTGCTTATGAGCTGAAGCTTTCTGCTCCAGTGCAAAAATTTAAGTAA 2148 0.4288 MLCACSSGEQFKFEEPPQSPDSLATRDFSASGLSSRTTGEWEPKFDEAQVEQAESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIKGLTLRMIKAIAERTKQRKPRSKADIVVSNVMSLHSVSLLLEAILLKARSLEELGECIEAAKECRIILDTVESALPNGIPEGIGEDCKLKEMFHKALELLPRLWIKAGFLDEAVAAYRRALVKPWSLEPQRLAAVQKDLATTLLYGGVEVSLSSQLQVWGETTPTNSVEEAIHLLVILMSKVAIGEIDWDAEIMDHLTFALSVTGMFELLADHVEQILPGIYSRAERWYFLALCFSAAGHDEVALNLLRKACGSSEANHKPHFPSFLLGAKLCSLDSRHAHEGINFSRKVIELAKHQNEHFLGQGHTFLGICYGAAARISVLDSERSIFERESLDSLNCAAVNGNDDLEAIFSLGLENAIQRNLDAAYNNIMMFSDMTVGSSRGWQLLALIVSGQHRFKDAETIVDFALDEAGGMDQLDLLRLKAILQIAQQQPRQAIETYRILLALIQAKKELWLQDNINREQACRQEALTERKLEMEAWQDLATIYTDIGSLIDAKTCVDKAQLIEFFSPRSWHITGLMLEAQSLYREAFISFSISLSVEPDYVPSIISTAELLTKLGMQSLPIARSFLMNALRLEPTNHDAWFNLGLVSKMEGSLQQAAEFFQAAYELKLSAPVQKFK* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0738 715 ProSiteProfiles TPR repeat profile. 676 709 IPR019734 GO:0005515
Pvu9g0738 715 MobiDBLite consensus disorder prediction 22 38 - -
Pvu9g0738 715 SUPERFAMILY TPR-like 561 706 IPR011990 GO:0005515
Pvu9g0738 715 SUPERFAMILY TPR-like 49 387 IPR011990 GO:0005515
Pvu9g0738 715 Pfam Tetratricopeptide repeat 48 90 - -
Pvu9g0738 715 PANTHER PROTEIN NPG1 1 715 IPR043376 -
Pvu9g0738 715 Coils Coil 58 78 - -
Pvu9g0738 715 MobiDBLite consensus disorder prediction 1 43 - -
Pvu9g0738 715 SUPERFAMILY TPR-like 427 599 IPR011990 GO:0005515
Pvu9g0738 715 PANTHER PROTEIN NPGR1 1 715 - -
Pvu9g0738 715 SMART tpr_5 512 545 IPR019734 GO:0005515
Pvu9g0738 715 SMART tpr_5 606 639 IPR019734 GO:0005515
Pvu9g0738 715 SMART tpr_5 319 352 IPR019734 GO:0005515
Pvu9g0738 715 SMART tpr_5 676 709 IPR019734 GO:0005515
Pvu9g0738 715 SMART tpr_5 476 509 IPR019734 GO:0005515
Pvu9g0738 715 Gene3D Tetratricopeptide repeat domain 39 250 IPR011990 GO:0005515
Pvu9g0738 715 Gene3D Tetratricopeptide repeat domain 424 710 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0738 Pvu-Chr9 12001858 12006041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0738 1 714 Calmodulin-binding Proteins AT1G27460 58.914 0.0 842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0738 9 12001858 12006041 Pvu9g0738 9 12001858 12006041 ECH
Pvu1g0282 1 2583597 2588082 Pvu9g0738 9 12001858 12006041 PCT