Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0711 ATGGAGACCCGCGCCGCCGCAGCAAAGAGAAAGGCAACCGCGGCTGTTGCCCCTGTGGTCGTGGTCGAAAAGCCACACCCCAAAAGGCAGCGTGTTGTTTTGGGTGAACTTTCAAATTATCCAAATGCTATTGTCCCCGAAACTCAAAATCAACGCAAAGAAAAACTGCAATGTCGGAAGAATCCAAATTTGAAGAAACCCTCTCCTGCGAATTCCACTCCCCTTTCCTCCCAGATTGTCCAACCTTATGTTTCCGACATCTATGAGTATCTGCATGCAATGGAGATGCAGAGGAAGAGGAGACCGATGGTTGATTACATCGAGAAAGTTCAGAGAGAAGTTACTGTAATCATGAGGACAATATTGGTGGATTGGCTAGTAGAGGTAGCTGAAGAGTACAAGCTTCAATCCGACACCCTTCATCTCTCTGTTTCATACATAGACAGGTTTTTATCTGTTAATCCTGTTAGTAAGTCAAGACTTCAGTTACTGGGTATTTCGTCCATGCTCATTGCTGCTAAGTACGAGGAAGTTGACCCACCCCGTGTTAAAGCTTTCTGCAGTATCACTGATAACACATACAATAAGAAAGAGGTTGTAAAGATGGAAGCTGACATACTTAAGTCTCTGAAGTTTGAGATGGGAAATCCTACTGTAAATACCTTTCTAAGGAGGTTTGCTGATGTTGCCTCTGATAACCAAAAGGCTCCAAATTTACTGTTTGAATTTCTGAGCTGCTATCTTGCTGAGCTTAGTTTGATGGACTATGATTGCTTGAGAATTTTGCCTTCTATTGTGGCAGCATCTGCTGTATTTCTTGCCAGATTTATTATCTCTCCTGAAGTTCATCCTTGGACTTCTTCCTTGTGTGAATGCTCTGGTTATGAAGCATTTGAACTGAAAGAATGTGTCATCATCTTGCATGACTTGTATTTGTCAAGAAAGGCAGCATCCTTCAAAGCTATTAGGGAGAAATACAAGCAGCACAAGTTTAAGTTTGCAGCAAACTTGCCTTCTCCTCCACATGTGCCAAGTCATTACTTTGAAACTCAGTGA 1056 0.4252 METRAAAAKRKATAAVAPVVVVEKPHPKRQRVVLGELSNYPNAIVPETQNQRKEKLQCRKNPNLKKPSPANSTPLSSQIVQPYVSDIYEYLHAMEMQRKRRPMVDYIEKVQREVTVIMRTILVDWLVEVAEEYKLQSDTLHLSVSYIDRFLSVNPVSKSRLQLLGISSMLIAAKYEEVDPPRVKAFCSITDNTYNKKEVVKMEADILKSLKFEMGNPTVNTFLRRFADVASDNQKAPNLLFEFLSCYLAELSLMDYDCLRILPSIVAASAVFLARFIISPEVHPWTSSLCECSGYEAFELKECVIILHDLYLSRKAASFKAIREKYKQHKFKFAANLPSPPHVPSHYFETQ* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0711 351 ProSitePatterns Cyclins signature. 119 150 IPR006671 -
Pvu9g0711 351 SMART Cyclin_C_2 217 340 IPR004367 -
Pvu9g0711 351 SUPERFAMILY Cyclin-like 217 342 IPR036915 -
Pvu9g0711 351 Gene3D - 86 335 - -
Pvu9g0711 351 Pfam Cyclin, N-terminal domain 86 214 IPR006671 -
Pvu9g0711 351 Pfam Cyclin, C-terminal domain 217 339 IPR004367 -
Pvu9g0711 351 PANTHER CYCLIN-A3-1-RELATED 23 350 - -
Pvu9g0711 351 MobiDBLite consensus disorder prediction 44 76 - -
Pvu9g0711 351 PIRSF Cyclin_A_B_D_E 2 350 IPR039361 -
Pvu9g0711 351 SUPERFAMILY Cyclin-like 78 214 IPR036915 -
Pvu9g0711 351 CDD CYCLIN 118 207 IPR013763 -
Pvu9g0711 351 PANTHER CYCLINS 23 350 IPR039361 -
Pvu9g0711 351 Gene3D - 100 215 - -
Pvu9g0711 351 SMART cyclin_7 124 208 IPR013763 -
Pvu9g0711 351 SMART cyclin_7 221 309 IPR013763 -
Pvu9g0711 351 CDD CYCLIN 217 308 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0711 Pvu-Chr9 11706505 11709065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0711 6 349 Core Cell Cycle Gene Families AT1G47210 52.066 1.29e-129 374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0262 1 2349235 2353179 Pvu9g0711 9 11706505 11709065 PCT