Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0700 ATGGCTTCGGCGAAGGACATGGATCGGATAAAAGGGCCATGGAGTCCCGAAGAGGACGAAGCCTTGCGGAGGTTCGTTCAGATTTACGGGCCCAGAAACTGGTCCCTCATAAGCAAATCCATTCCGGGTCGCTCTGGGAAATCCTGTCGGTTGCGGTGGTGCAATCAGCTGTCGCCCGAGGTTGAGCACCGGCCTTTCACGGCGAAGGAAGACGAAACGATCGTGAAGGCGCACGCCAGGTTCGGGAACAAGTGGGCCACCATCGCTCGCTTCCTCAACGGCCGCACCGACAACGCCATCAAGAACCATTGGAATTCCACACTAAAGAGGAAATGCTCCGAACCTCCCTCCGACCCTCGGCCTCTGAAAAGAGTCGCCAGTGGTTCGGATAGCCCATCCGGATCCGATTTGAGCGATTCGGGTTTACCCGCTACTTCTCCAAACCCTATTTACCAACCTCTTGCTGGGAGCGTAAGCGTGAGCCTCGTGCCCTCTACCCTGCTTGCGGAAACTGCGTCTTCTTCTGCAACTGATATCGCCACGTTACTGAGTCTGTCTCTACCTGGATCCAATTCGTGCAATGGAGCTAGCAATGGGCCTGGGCCTGGGCCTGGGACGAACGGTTCGGAGCAGTTGTTGAGCGAAGAGTTGTTGAAGGTGATGCAAGATATGATACGCGTGGAAGTGAGGAATTACATGTCTGGATTGGAACGTAACGGGGTGTTTATGCAAAACGATGCCATAGGAAACGCGGTTCTAAAGAGGATGGGAATTGGAATGCTCGAGTAG 789 0.545 MASAKDMDRIKGPWSPEEDEALRRFVQIYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPFTAKEDETIVKAHARFGNKWATIARFLNGRTDNAIKNHWNSTLKRKCSEPPSDPRPLKRVASGSDSPSGSDLSDSGLPATSPNPIYQPLAGSVSVSLVPSTLLAETASSSATDIATLLSLSLPGSNSCNGASNGPGPGPGTNGSEQLLSEELLKVMQDMIRVEVRNYMSGLERNGVFMQNDAIGNAVLKRMGIGMLE* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0700 262 Gene3D - 10 62 - -
Pvu9g0700 262 CDD SANT 65 108 IPR001005 -
Pvu9g0700 262 Pfam Myb-like DNA-binding domain 11 57 IPR001005 -
Pvu9g0700 262 Pfam Myb-like DNA-binding domain 65 107 IPR001005 -
Pvu9g0700 262 PANTHER MYB PROTEIN-RELATED 7 200 - -
Pvu9g0700 262 Gene3D - 64 127 - -
Pvu9g0700 262 MobiDBLite consensus disorder prediction 128 149 - -
Pvu9g0700 262 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Pvu9g0700 262 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 7 200 - -
Pvu9g0700 262 MobiDBLite consensus disorder prediction 106 149 - -
Pvu9g0700 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 61 IPR017930 -
Pvu9g0700 262 SMART sant 10 59 IPR001005 -
Pvu9g0700 262 SMART sant 62 110 IPR001005 -
Pvu9g0700 262 CDD SANT 13 55 IPR001005 -
Pvu9g0700 262 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Pvu9g0700 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 112 IPR017930 -
Pvu9g0700 262 ProSiteProfiles Myb-like domain profile. 6 57 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0700 Pvu-Chr9 11618726 11620806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0700 5 241 MYB Transcription Factor Family AT4G37260 48.276 1.20e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu9g0700 Myb_DNA-binding 1.8e-16 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0700 9 11618726 11620806 Pvu2g0153 2 1692701 1694639 ECH
Pvu9g0700 9 11618726 11620806 Pvu3g2472 3 46311343 46313013 ECH
Pvu9g0700 9 11618726 11620806 Pvu9g0700 9 11618726 11620806 ECH
Pvu1g0257 1 2276980 2278706 Pvu9g0700 9 11618726 11620806 PCT