Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0693 ATGGGAAAAAGTAGATCTTCCACACCCACGATCCTCATCGTGTTCTTCACGGTCTTGGCAGTGTCGTCCGCGTTGGACATGTCCATAATCTCGTACGACAGAACCACCCACGCCGACAAGACAGAGCGGAGGAGCGACGAGGAGGTGAGGAGCATTTACGAGGAGTGGCTGGTGAAGCATGGGAAGGTGCCCAGTACCCTCGCCCTGAAGGAGAAGAGGTTTCAGATTTTCAAAGACAACCTGAAGTTTATCGACGACCACAATGCTGAAAACCGGACATACAAGGTTGGACTGAACCGGTTCGCCGATCTTAGCAACGATGAATACCGGTCCAAGTACCTGAGAACCAAGATTAACCCTCTCAGGATGACGGCGAAGCCAAGTAACCGTTACGCTCCGCGCGTGGATGACATCTTGCCGGAATCTGTTGATTGGAGGAAAGAAGGTGCTGTGGTGAGAGTGAAAGACCAGGCAGAGTGCGACGGTTGCTGGGCATTCTCAGCAATTGCCTCAGTGGAAGGGATTAACAAGATAGTAACAGGCAATCTAACTGCATTGTCAGAGCAAGAACTGTTGGACTGTGACAGAACAGTAAACGCAGGTTGTAGTGGCGGACTTGTTGATTACGCCTTTGAGTTCATTATAAACAACGCTGGCATTGACACCGAAGATGATTACCCCTTTCAAGGTGCTGATGCTATATGTGATCAAAATAAGCAAAATGCGAGAGCTGTTACAATTGATGGATATGAACGTGTTCCTGCCTATGACGAGTTAGCCTTGAAAAAGGCAGTAGCAAATCAACCAGTGAGTGTTGCCATTGAAGCATATGGCAGAGAGTTTCAGTTATATGAATCGGGTATATTCACAGGAGCATGCGGTACTTTGATAGATCATGGTGTTGCAGCTGTTGGTTATGGTGCAGAAAATGGAACTGAGTATTGGGTGGTGAAGAATTCATGGGGTGAGAAATGGGGAGAGGAAGGTTATGTAAGAATGGAACGCAATATAGCAGAAGACAGTGCAGGGAAGTGCGGAATTGCGATCCTGTCATATTATCCCATTAAGAGTGGCCAAAATCTCTCAAACCCTGTCAACTTCAGTAACCCAACTTTACAGTAG 1122 0.4733 MGKSRSSTPTILIVFFTVLAVSSALDMSIISYDRTTHADKTERRSDEEVRSIYEEWLVKHGKVPSTLALKEKRFQIFKDNLKFIDDHNAENRTYKVGLNRFADLSNDEYRSKYLRTKINPLRMTAKPSNRYAPRVDDILPESVDWRKEGAVVRVKDQAECDGCWAFSAIASVEGINKIVTGNLTALSEQELLDCDRTVNAGCSGGLVDYAFEFIINNAGIDTEDDYPFQGADAICDQNKQNARAVTIDGYERVPAYDELALKKAVANQPVSVAIEAYGREFQLYESGIFTGACGTLIDHGVAAVGYGAENGTEYWVVKNSWGEKWGEEGYVRMERNIAEDSAGKCGIAILSYYPIKSGQNLSNPVNFSNPTLQ* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0693 373 Pfam Papain family cysteine protease 139 355 IPR000668 GO:0006508|GO:0008234
Pvu9g0693 373 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 314 333 IPR025661 -
Pvu9g0693 373 PRINTS Papain cysteine protease (C1) family signature 157 172 IPR000668 GO:0006508|GO:0008234
Pvu9g0693 373 PRINTS Papain cysteine protease (C1) family signature 299 309 IPR000668 GO:0006508|GO:0008234
Pvu9g0693 373 PRINTS Papain cysteine protease (C1) family signature 314 320 IPR000668 GO:0006508|GO:0008234
Pvu9g0693 373 Gene3D Cysteine proteinases 34 357 - -
Pvu9g0693 373 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 34 362 - -
Pvu9g0693 373 CDD Peptidase_C1A 140 354 IPR039417 -
Pvu9g0693 373 SUPERFAMILY Cysteine proteinases 45 355 IPR038765 -
Pvu9g0693 373 PANTHER CYSTEINE PROTEASE 34 362 - -
Pvu9g0693 373 Pfam Cathepsin propeptide inhibitor domain (I29) 53 109 IPR013201 -
Pvu9g0693 373 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 297 307 IPR025660 -
Pvu9g0693 373 SMART pept_c1 139 355 IPR000668 GO:0006508|GO:0008234
Pvu9g0693 373 SMART Inhibitor_I29_2 53 109 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0693 Pvu-Chr9 11521263 11523831 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0693 9 11521263 11523831 Pvu3g2478 3 46396634 46399229 ECH
Pvu9g0693 9 11521263 11523831 Pvu11g0427 11 3623925 3626280 ECH
Pvu9g0693 9 11521263 11523831 Pvu9g0693 9 11521263 11523831 ECH
Pvu1g0250 1 2190319 2194581 Pvu9g0693 9 11521263 11523831 PCT