Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0690 ATGAAGCAGTGGATACACGTGGCGCTGGCCGCATCCGCCGTGGGATGCGTCTCCACCCTTATCTTGGTCTTTCTCTGGCGTTGGTGTCACAAAAAAAACGGCACGAATTTCGTTGAACCGGCTAGTTTGACCAGGGTGGAGAGTGTGCAGGGAGGGATTTCTGTTTCCAGGCTTCATCCGCAACCTTTTCAGTTGGATCAGGGGAGCAAGAACAGCAACAAGGGTAATTACAATTACTATATTTTTCGCGGTGGTGGGGTGTCGGGGAAGAAAAGCTTCTTCAACTGGGGTGATCACCCGTCCATGGCCGCTGATGCTGTTGAAAATGGATGGTCACGATTTGCCTTCACGGGGTACAAGAGTTACACGCCGTCTCCTTCGAAAAGATCGTCACTTTTGGGAGCGTGTGCTGCACCGGGAGGAAGTGATTTTGGGAGAGAATCAGAGGCCGAGATAAGCTGGGAAGTGTCACGTGGATCTGCTGAGTTTATGCAGAAGGTGAGGTTGAATCCTGGTATAAAAAAATCTCAGCAAAGCAACAACAATCATGCTTCTCTGGACGTTGCTTCTATCATTAGAGGGGCTTTGCCTCTGCCTGGGCCTCCTCTGGGGAATTGTGCGTTCCCACAAGAAGCATATTTTGAGATTACCATTTTGTACTCACGTGGTGACGAGTGTGAATCTGTTGGAAAGAGTGGGGAAGGCGAGAAAACCAAGCTTTTGGTTCAAGGGAACTCCAATGGTAAAGGAAATTCTGAAGCTTTGGTTCATGTTATCAGTGGGAATGGAAGTAATAAAATCAACAATGTTGAAGGAGAGGGTGGGAAGGGTGAATCTTTGATGTTCTCGTTGGGGTTAACAGCAGGGGGTTCTGTTCCTTTGAGAGTTCCCGGTAGCTATCCTGGAAGCATTGGCTTCAACTCCAACGGTTCTCTCTATCTTGATGGAATGAAACTTGTAAGCGAATCGGAGAAGGCAGAGTGGGTGGGAACTGATAAAGTGATTGGTTGTGGATTTGATCCAAGGCAGAAGAAGGTTTTCTTCACAGTAGACTCTGATCTAATGCATGTAATTCACTGCCAGACAGAGGAGTTTGGCACACCACTTTTTCCAATCATGGCTGCAAATATAGACATTATGGTGTTAGTTAATTTTGGACAGAGTGCATTCAAATATGCACCTGCCAATGCCCAGAGAACACCAAATCCATGCTTCATAGCCCCACTTGTAAATTCCCCTGCTGCTACCTTGGGCTATGATGACAGCAAGGAGCTATTCTCAATGGGAAGGATCGATTCTCAGTGGCTCAATCGCTCCACAACCAAAGGAAGTCACAATAATAATAATAACCATAATAATAATGGAACATTGGATTTCGACGAGGAGTCTGAGGCTGATCTATTTGAAATCGTCTTAGATGGTTCTGGAAAATGTCCATATCCAGCATCATAG 1452 0.4628 MKQWIHVALAASAVGCVSTLILVFLWRWCHKKNGTNFVEPASLTRVESVQGGISVSRLHPQPFQLDQGSKNSNKGNYNYYIFRGGGVSGKKSFFNWGDHPSMAADAVENGWSRFAFTGYKSYTPSPSKRSSLLGACAAPGGSDFGRESEAEISWEVSRGSAEFMQKVRLNPGIKKSQQSNNNHASLDVASIIRGALPLPGPPLGNCAFPQEAYFEITILYSRGDECESVGKSGEGEKTKLLVQGNSNGKGNSEALVHVISGNGSNKINNVEGEGGKGESLMFSLGLTAGGSVPLRVPGSYPGSIGFNSNGSLYLDGMKLVSESEKAEWVGTDKVIGCGFDPRQKKVFFTVDSDLMHVIHCQTEEFGTPLFPIMAANIDIMVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPAATLGYDDSKELFSMGRIDSQWLNRSTTKGSHNNNNNHNNNGTLDFDEESEADLFEIVLDGSGKCPYPAS* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0690 483 Pfam SPRY domain 213 387 IPR003877 GO:0005515
Pvu9g0690 483 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Pvu9g0690 483 PANTHER RAN BINDING PROTEIN 9-RELATED 2 480 - -
Pvu9g0690 483 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 2 480 - -
Pvu9g0690 483 Gene3D - 173 400 IPR043136 -
Pvu9g0690 483 SUPERFAMILY Concanavalin A-like lectins/glucanases 295 392 IPR013320 -
Pvu9g0690 483 MobiDBLite consensus disorder prediction 438 456 - -
Pvu9g0690 483 MobiDBLite consensus disorder prediction 438 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0690 Pvu-Chr9 11458849 11461556 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0690 9 11458849 11461556 Pvu9g0690 9 11458849 11461556 ECH
Pvu1g0245 1 2124713 2127337 Pvu9g0690 9 11458849 11461556 PCT