Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0644 ATGAGCACCGCTAACTCTAACAACCCTTCTTCTCCTCCACCTACGATCAAACAACGTAGGCTCACTCGACAGGGGAGACTCCGATACGTCACTGACAAAGACGCTGGTCTGCATTCCACCACTTCTCTACCCTCTTCTCCTCTTCCCTCCTTCAAGTCCGCTTCCGATCATTGGTCTTCCTCTGCGGTTCCGCAACCGCTTCCGCGTCCAGACTCCCCGTTGACCCGCCGATACGACCATCATCACCTCGGATCTCCCCCTTTCGAACATCCTGGCTTCGCTTTTCCCAGAAGGTCGGTGGATCATGAAGCGGTGAGAAGTATAAGGTGTGCCAGCAATTTGGGTAGACCTTCTTTTGATCCGGGGGCTTCTAATGCCAAACACGATTTAAGAGTGAACATTCCACCTGCAAGAGTGTTGGCAGGTAATACTAGTTCATGTAAAGATCACACAGAACACTCTCAAGATAATGACTCCGAAAATGTTTCCAACTTGAGATTGCATTTTTCGGCCAAGAGTGCCCCCAATAGCATATTCTCCAGCCCTGTCACTAGTCCACGTAGATCCAGCAATGTAGATTTCTATGATCCTTCTATCATTTTTCCTCAAGATTTTAATGACATTTTGAGAGTGTCACCGGCTAAAACTGCTCAGAGTCCAGATCGGACTCCTCTGCGCAGCCCAGGGAGCCTCCTCAATCCAGAGGGATGTCAGAGTCAGCTTCATAAACATAGCTCAAGAGTGTTGCCTGAAAATAATCATGTTGATGCACATCCACTGCCCCTTCCTCCTAGAGCGTCACCACCGCCAGCACAGTCATCTCCCCAGCATCAACCAAGTATCTTGCACCTCACCGTAGAAAATTCACCTTCAATGAAAGGTCAATGGCAGAAAGGAAAACTTATAGGGCGGGGATCATATGGATCTGTTTATCACGCAACCAACTTAGAGACTGGAGCCTCGTGTGCAATGAAAGAGGTGGAAATGTTCCCCGATGATCCTAAATCTGCCGACTGCATAAAGCAACTTGAACAGGAAATTAGAATTCTCCGTCAATTACACCATCCCAACATTGTGCAGTATTATGGAAGTGAATTAGATGGAGATCGACTATACATATATATGGAGTATGTTCATCCTGGATCACTTGATAGGTTTATGCATGAACATTGTGGAGCTATGACAGAATCTGTCATTCGCAACTTCACAAGACATATTCTCTCTGGATTGGCATATTTGCATAGTACAAAGACTATTCACAGGGATATCAAAGGTGCAAACTTGTTGGTTGATGCATCAGGCATGGTTAAACTTGCGGATTTCGGGGTGTCAAAAATTCTGACAGAGAAATCATATGAACTTTCATTGAAGGGTAGTCCCTACTGGATGGCTCCCGAGCTCATGAAGGCTGCCATAAAGAAAGAATCCAGTCCTGACGTTGCGTTGGCCATTGATATATGGAGCTTAGGATGCACTATCATCGAAATGCTGACAGGAAAACCTCCTTGGGGGGAATATGAAGGGCCGCAAGCCATGTTCAAGGTACTGCACAAATCCCCAAAAATACCAGAAAATTTGTCGTCAGAGGGACATGATTTCCTTCAGCAGTGCTTCAGAAGGAATCCTGCAGATCGACCATCGGCAGCACTGCTTCTTACTCATGCCTTTGTACAAAATTTGCACGATCAAGATGCTCTACTTCATTCACAAGGGCAAAGCTGTCCCAGAGGAGACCCTGGATCAGGAGATGATTCAAGTAGACATAGTCCCGGTCACAGTTCAAGAAATAATAACCGTAGTGTAGTGCCAGCCTCCATTGGCGCAAGGTTTTTGCACAAAATTCATAATTTAATAGGTGACACTTCGAAAAAATATGACAGCGAGGAATCTAATCATGTTACTTCTTCTCGTAAGTCTGCATGCTCGATGACAGAAATAAACAGTCCTCAATCTCCTTTGAAATCTGGTGCCCTCAATTACATGGCCAATTCCAGCAACATACCCCTCACCACCGTTATGAGAATCATCAGGCACATTTGA 2040 0.4569 MSTANSNNPSSPPPTIKQRRLTRQGRLRYVTDKDAGLHSTTSLPSSPLPSFKSASDHWSSSAVPQPLPRPDSPLTRRYDHHHLGSPPFEHPGFAFPRRSVDHEAVRSIRCASNLGRPSFDPGASNAKHDLRVNIPPARVLAGNTSSCKDHTEHSQDNDSENVSNLRLHFSAKSAPNSIFSSPVTSPRRSSNVDFYDPSIIFPQDFNDILRVSPAKTAQSPDRTPLRSPGSLLNPEGCQSQLHKHSSRVLPENNHVDAHPLPLPPRASPPPAQSSPQHQPSILHLTVENSPSMKGQWQKGKLIGRGSYGSVYHATNLETGASCAMKEVEMFPDDPKSADCIKQLEQEIRILRQLHHPNIVQYYGSELDGDRLYIYMEYVHPGSLDRFMHEHCGAMTESVIRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGMVKLADFGVSKILTEKSYELSLKGSPYWMAPELMKAAIKKESSPDVALAIDIWSLGCTIIEMLTGKPPWGEYEGPQAMFKVLHKSPKIPENLSSEGHDFLQQCFRRNPADRPSAALLLTHAFVQNLHDQDALLHSQGQSCPRGDPGSGDDSSRHSPGHSSRNNNRSVVPASIGARFLHKIHNLIGDTSKKYDSEESNHVTSSRKSACSMTEINSPQSPLKSGALNYMANSSNIPLTTVMRIIRHI* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0644 679 SUPERFAMILY Protein kinase-like (PK-like) 270 565 IPR011009 -
Pvu9g0644 679 SMART serkin_6 296 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0644 679 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 12 676 - -
Pvu9g0644 679 MobiDBLite consensus disorder prediction 212 278 - -
Pvu9g0644 679 MobiDBLite consensus disorder prediction 569 602 - -
Pvu9g0644 679 MobiDBLite consensus disorder prediction 35 62 - -
Pvu9g0644 679 ProSitePatterns Protein kinases ATP-binding region signature. 302 325 IPR017441 GO:0005524
Pvu9g0644 679 MobiDBLite consensus disorder prediction 212 246 - -
Pvu9g0644 679 MobiDBLite consensus disorder prediction 141 161 - -
Pvu9g0644 679 ProSiteProfiles Protein kinase domain profile. 296 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0644 679 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 12 676 - -
Pvu9g0644 679 MobiDBLite consensus disorder prediction 1 18 - -
Pvu9g0644 679 Gene3D Transferase(Phosphotransferase) domain 1 293 578 - -
Pvu9g0644 679 MobiDBLite consensus disorder prediction 261 275 - -
Pvu9g0644 679 MobiDBLite consensus disorder prediction 1 94 - -
Pvu9g0644 679 MobiDBLite consensus disorder prediction 634 649 - -
Pvu9g0644 679 MobiDBLite consensus disorder prediction 622 649 - -
Pvu9g0644 679 Pfam Protein kinase domain 297 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0644 Pvu-Chr9 10921149 10927462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0644 135 559 MAP Kinase Kinase Kinase AT5G66850 50.628 2.06e-148 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pvu9g0644 Pkinase 8.5e-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0644 9 10921149 10927462 Pvu9g0644 9 10921149 10927462 ECH
Pvu1g0196 1 1635308 1640727 Pvu9g0644 9 10921149 10927462 PCT