Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0637 ATGTGCACCTCTCCGCACGCAGTAATGCCAACCTTTGCACCCATGCCAGAGCCAGACCTCTCCTTAAACATCAGCCCTCCCTTCACTTCAGATCCTGACGCTAAACAGGTGGAAACAACCTGCACCGGATTAACGTTAACCACCAAAACGCTTTACACCGATCTGTGCTCAACCTCGGATTCTGGTAGCAGTGGAAGCGATTTAAGCAACGAAAATGGTTTTAGCAACACTCTCTACAACCTTGGTCATCGTGAACCAACATTGAGCTTAGGCTTCGGAAGGGAAAATTTGAATCCTTATCGTATCCAAGGAGCAGTGTTGAGAAACTTCAATCACCACAACAACCAACCTCAGACCAATACCTTTGATTTCAAACGAAATGCTAGAGGCATTCCAGGTGTGAAAAGAAGCTCCAGAGCTCCTAGAATGCGATGGACTACGACCCTCCACGCTCATTTTGTTCATGTGGTTCAACTTCTTGGCGGGCATGAAAGGGCAACTCCGAAGTCTGTGTTAGAGTTAATGAACGTTAAGGATCTAACTCTAGCTCACGTGAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCTCTGACAAAAGCAGCGCAGGTTATGGGCAGACAGGTATAGGGTTGAGCCAAAAACCAGGGATTGTCGATCTGCATGGAGCCTTAGCTTGTGAGAGACCAAATTTGCCACAGCCGCTGTTAAAGTTCCACAGGGCGCCATGGCAGTCATCGATGGAGACAAATTCCATAAATTACACACAGAACCCCATTATCAATTCAATGTATTCTCATCTCAAAGGAAACCAAACCATGGTGGGTGGACAGCATTATGGAGGCCTGTCGAATTGCATGGAGGAGAAATTGGAATCTTGCTCTTTGTCACGTTCCGATATGACGCTAGACCTAGAATTTACCCTTGGAAGGCCCACTACTTGCAAAGAGATCACGCAGAAACAAGAGAATTAA 975 0.4626 MCTSPHAVMPTFAPMPEPDLSLNISPPFTSDPDAKQVETTCTGLTLTTKTLYTDLCSTSDSGSSGSDLSNENGFSNTLYNLGHREPTLSLGFGRENLNPYRIQGAVLRNFNHHNNQPQTNTFDFKRNARGIPGVKRSSRAPRMRWTTTLHAHFVHVVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSSDKSSAGYGQTGIGLSQKPGIVDLHGALACERPNLPQPLLKFHRAPWQSSMETNSINYTQNPIINSMYSHLKGNQTMVGGQHYGGLSNCMEEKLESCSLSRSDMTLDLEFTLGRPTTCKEITQKQEN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0637 324 SUPERFAMILY Homeodomain-like 138 195 IPR009057 -
Pvu9g0637 324 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 141 194 IPR006447 GO:0003677
Pvu9g0637 324 Pfam Myb-like DNA-binding domain 142 193 IPR001005 -
Pvu9g0637 324 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 317 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pvu9g0637 324 Gene3D - 140 197 - -
Pvu9g0637 324 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0637 Pvu-Chr9 10871451 10875543 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu9g0637 Myb_DNA-binding 2.2e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0637 9 10871451 10875543 Pvu9g0637 9 10871451 10875543 ECH
Pvu1g0188 1 1561647 1565391 Pvu9g0637 9 10871451 10875543 PCT