Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0618 ATGGAATCAACTTGTGCAACCCTGAGTGGCATTCTAGCTAAAGTTAGTGAGGGAACTGGAAGAAACAGGAGAAGTGGGTTCTGGGGTGAGAGTACAAGGGGAAGTGGGAACACAAGGTTTTTGAGTGTTCAATCATGCAAAACTTCACAAACCAGTAAGAATCTTAGAAACTCTAAGCCTCCTGGAATTCCACGTGCTGTTCTCACATCAGACATCAACGAAGATTCCATGGCATATCAGGGGGTACCCACTTTTCAGACTACCGAAGTGAACCCAAAAAGTGTGGCTTCTATAATTTTGGGTGGAGGTGCAGGAACTCGCCTTTTTCCTCTCACTGGCAGAAGAGCCAAGCCAGCGGTTCCAATTGGGGGGTGTTATAGACTCATAGATATCCCCATGAGCAATTGCATCAACAGTGGCATCAGAAAAATATTCATTATGACGCAGTTTAACTCTTTCTCTCTCAACCGCCACCTGTCCCGCACATACAGCTTTGGAAATGGCATGAATTTTGGAGACGGTTTTGTGGAGGTCTTGGCTGCTACTCAGACACCTGGAGAGACAGGGAAGAAATGGTTCCAGGGAACAGCTGATGCTGTTAGGCAATTTATATGGGTTTTTGAGGATGCCAAGAACAAGAATGTGGAGCATATATTGATACTTTCTGGGGATCATCTTTACCGGATGAACTATATGGACTTTGTACAGAGACACGTTGACACCAATGCTGATATCACAGTTTCATGTGTACCCATGGATGACAGCCGCGCATCAGACTATGGACTGATGAAAATTGATAAAACCGGACGAATTGTACAGTTTGCAGAAAAACCTAAGGGATCAGATCTGAAGGCAATGCGTGTTGACACCACTCTTCTAGGGTTATCACCACAAGAAGCAGAAAAACATCCTTATATTGCATCCATGGGTGTCTACGTGTTTAGAACTGAAACCCTGCTGCAACTATTAAGATGGCAATATTCTTCATGCAATGACTTTGGATCTGAAATTATCCCATCTGCTGTGAGCGAGCACCATGTTCAGGCATATTTGTTCAATGACTACTGGGAAGATATTGGAACTATAAAGTCCTTTTTTGATGCAAACCTCGCCCTAACAGAACAGCCTCCTAAATTTGAATTTTATGATCCAAAGACACCTTTCTTCACTTCCCCAAGATTCCTTCCACCCACTAAAGTAGAAAAATGCAAGATAGTGGATGCAATTATTTCTCACGGTTGCTTCATGAGGAACTGTAGCGTTCAGCACTCTATTGTGGGAGTACGCTCACGTTTAGAGTCTGGTGTGGAGCTTCAGGATACCATGATGATGGGTGCTGACTACTATCAGACTGAGTCTGAAATTGCATCTTTACTGGCAGAAGGAAAGGTTCCAATTGGTGTTGGGGAAAATACCAAAATCAGGAATTGCATAATCGACAAGAATGCCAAGATAGGAAGAAATGTGATAATCGCAAATGCAGATGGTGTTCAAGAAGCTGATAGGGCCAAGGAAGGATTCTACATCAGGTCTGGCATCACGATTACACTGAAAAATGCAACAATTAAAGATGGAACAGTAATATGA 1587 0.431 MESTCATLSGILAKVSEGTGRNRRSGFWGESTRGSGNTRFLSVQSCKTSQTSKNLRNSKPPGIPRAVLTSDINEDSMAYQGVPTFQTTEVNPKSVASIILGGGAGTRLFPLTGRRAKPAVPIGGCYRLIDIPMSNCINSGIRKIFIMTQFNSFSLNRHLSRTYSFGNGMNFGDGFVEVLAATQTPGETGKKWFQGTADAVRQFIWVFEDAKNKNVEHILILSGDHLYRMNYMDFVQRHVDTNADITVSCVPMDDSRASDYGLMKIDKTGRIVQFAEKPKGSDLKAMRVDTTLLGLSPQEAEKHPYIASMGVYVFRTETLLQLLRWQYSSCNDFGSEIIPSAVSEHHVQAYLFNDYWEDIGTIKSFFDANLALTEQPPKFEFYDPKTPFFTSPRFLPPTKVEKCKIVDAIISHGCFMRNCSVQHSIVGVRSRLESGVELQDTMMMGADYYQTESEIASLLAEGKVPIGVGENTKIRNCIIDKNAKIGRNVIIANADGVQEADRAKEGFYIRSGITITLKNATIKDGTVI* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0618 528 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 4 528 IPR011831 GO:0005978|GO:0008878
Pvu9g0618 528 Pfam Nucleotidyl transferase 97 374 IPR005835 GO:0009058|GO:0016779
Pvu9g0618 528 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 307 317 IPR005836 GO:0005978|GO:0008878
Pvu9g0618 528 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 489 IPR029044 -
Pvu9g0618 528 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 192 200 IPR005836 GO:0005978|GO:0008878
Pvu9g0618 528 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 83 393 IPR029044 -
Pvu9g0618 528 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 101 120 IPR005836 GO:0005978|GO:0008878
Pvu9g0618 528 CDD LbH_G1P_AT_C 396 522 - -
Pvu9g0618 528 CDD ADP_Glucose_PP 98 359 - -
Pvu9g0618 528 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 96 492 IPR011831 GO:0005978|GO:0008878
Pvu9g0618 528 SUPERFAMILY Trimeric LpxA-like enzymes 390 528 IPR011004 -
Pvu9g0618 528 Gene3D Hexapeptide repeat proteins 394 528 - -
Pvu9g0618 528 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 4 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0618 Pvu-Chr9 10654688 10659730 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0618 9 10654688 10659730 Pvu9g0618 9 10654688 10659730 ECH
Pvu1g0129 1 1072803 1077581 Pvu9g0618 9 10654688 10659730 PCT