Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0617 ATGGCGGTGATGCGTCGGTTGCTTTTGGTTTTCTTTGTTCTGTGTGTGGCAGTGGAGCAGAGTAAGGTGCTGAAGGTAGAAGCAGACGATGGTGGTGCGTTTGTGAAAACAAGAGGAGTGCAGCTTATACTGAATGGAAGCCCCTACTATGCCAATGGCTTCAATGCCTATTGGCTTATGTACATTGCCTCTGATCCTTCTCAGAGAAACAAAGTATCCTCAGCCTTTCAACAGGCTTCAAATCATGGACTCAACATAGCCAGAACTTGGGCTTTCAGTGATGGTGGCTATAACCCCTTACAGTACTCTCCTGGATCCTACAACGAACAAGTCTTCCAGGGATTGGATTTTGCAATAGCCGAAGCAAGAAAATACGGGATGAAGCTGGTTCTGAGTTTGGTGAATAACTATGAGAACATGGGTGGCAAGAAACAATATGTAGAATGGGCAAGGAGTCAGGGACAGTCCATAAGTTCTGAAGATGACTTTTTCACAAATCCTGTGGCTAAGGGATTCTACAAAAACCACATCAAGGCTGTACTTACAAGACGTAATAGCATCACTGAAATTGCATACAAAGACGACCCAACTATAATGGCTTGGGAACTTATGAATGAGATTAGGTGCCCTTCTGATCAATCAGGAAAAACTGTTCAGGCTTGGATTTCTGAGATGGCATCTTACCTGAAATCCATAGATGGAAACCACTTGCTGGAAGCAGGTTTGGAGGGTTTCTACGGCCAGTCAAAGCCTCAGTCCAACCCAAACTTCAATGTTGGAACCGATTTCATTGCAAACAACCAAATCCCTGGCATTGATTTCGCAACAGTGCACTCTTACCCTGACCAATGGCTATCGAGTTCAGGTTATGAAGAGCAAATCTCATTCCTAGGGCGGTGGGTGGATGAGCACATCCAAGATGCACAGAACACTCTTCACAAACCAGTTCTCTTTGCGGAGTTCGGGATTTCCACAAAAAGCTTCGGTGGCAACTCATCGCCAAGGGATCGGTTATTCAACACGGTATATTCAGCAATATACTCATCCGCAAGTAGCGGTGGTGCTGCTGTTGGTGGCTTGTTTTGGCAGCTTCTAGCTCAAGGAATGGATTATTTTCGAGATGGTTACGAGGTGGTCTTAGATGAAAGCCCGTCGACGGCTAGTTTGATCGCTCAAGAGTCTCAAAAGCTAAACCACATTCGAAAGATGTACGTCAGACTCAGAAACATTGAGAAGTGGAATAGAGCTAAGGAAATTAGAGGCTCCCAATGGCATGTTGGTGCTAACGATGGAAACTAA 1299 0.4511 MAVMRRLLLVFFVLCVAVEQSKVLKVEADDGGAFVKTRGVQLILNGSPYYANGFNAYWLMYIASDPSQRNKVSSAFQQASNHGLNIARTWAFSDGGYNPLQYSPGSYNEQVFQGLDFAIAEARKYGMKLVLSLVNNYENMGGKKQYVEWARSQGQSISSEDDFFTNPVAKGFYKNHIKAVLTRRNSITEIAYKDDPTIMAWELMNEIRCPSDQSGKTVQAWISEMASYLKSIDGNHLLEAGLEGFYGQSKPQSNPNFNVGTDFIANNQIPGIDFATVHSYPDQWLSSSGYEEQISFLGRWVDEHIQDAQNTLHKPVLFAEFGISTKSFGGNSSPRDRLFNTVYSAIYSSASSGGAAVGGLFWQLLAQGMDYFRDGYEVVLDESPSTASLIAQESQKLNHIRKMYVRLRNIEKWNRAKEIRGSQWHVGANDGN* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0617 432 Gene3D Glycosidases 32 401 - -
Pvu9g0617 432 SUPERFAMILY (Trans)glycosidases 34 388 IPR017853 -
Pvu9g0617 432 PANTHER - 4 420 IPR045053 GO:0004553
Pvu9g0617 432 Pfam Cellulase (glycosyl hydrolase family 5) 51 327 IPR001547 GO:0004553|GO:0071704
Pvu9g0617 432 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 4 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0617 Pvu-Chr9 10651950 10655910 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0617 9 10651950 10655910 Pvu9g0617 9 10651950 10655910 ECH
Pvu1g0130 1 1078192 1081813 Pvu9g0617 9 10651950 10655910 PCT