Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0599 ATGGCCTCAAGCCAGGGTTGGACACCGAAGCAGAACAAAAGATTTGAGAATGCCCTTGCCATCTTCGACAAGGACACCCCAGATAGGTGGCACAACCTTGCCAGGGCCGTAGGAGGAAAAACTGTGGAAGATGTCAAAAGGCATTATGAGAAGCTCGTGGAAGATGTGAAGCAGATTGAGGAAGGCCATGTGCCCCTTCCCAATTACCGAACTGTTGCAACTATGGCAGGCAGCATCAGAGGTTACAGTTACATGGATGCAGAAAACAGGATGAAGGGCATGAGTCTGCAGTGA 294 0.5 MASSQGWTPKQNKRFENALAIFDKDTPDRWHNLARAVGGKTVEDVKRHYEKLVEDVKQIEEGHVPLPNYRTVATMAGSIRGYSYMDAENRMKGMSLQ* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0599 97 CDD SANT 7 53 IPR001005 -
Pvu9g0599 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 97 - -
Pvu9g0599 97 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Pvu9g0599 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 97 IPR044636 GO:0003700
Pvu9g0599 97 Coils Coil 42 62 - -
Pvu9g0599 97 SMART sant 3 55 IPR001005 -
Pvu9g0599 97 Gene3D - 1 66 - -
Pvu9g0599 97 SUPERFAMILY Homeodomain-like 5 61 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0599 Pvu-Chr9 10554264 10555038 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu9g0599 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0599 9 10554264 10555038 Pvu9g0599 9 10554264 10555038 ECH
Pvu1g0147 1 1192019 1193128 Pvu9g0599 9 10554264 10555038 PCT