LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu9g0585	ATGGAGACAATTTATTCTTCTCAACGAGAGAGCGTCCTTTTAGGTTATAATAATAATATTAGTTATGAGAATGGAAATAATTCTCTGATTCGGAGGTCGTCTTCGACCAATTCCAACTTGGAGGTTGATTTCAACGACGTGTTTGGGGGGCCGCCGCGGAGGTCATCGCTAAGCGAAGCGCGGCAGAGTCTGACCGAGTTGAAGGATTGGAGCGAAGAGGAAGGGGAAAGTGGTTGGTGTAGGTGGCCGCCGGAGCGGGAGAAACCGGTGTTTGGAGAGGATATTGGAAACCGGAGGCGTCACGGCAACAAGAACAATGACTTCTTCGATGACATTTTCGGAGGTGAGGAATCGGCGAGTGTGTGTTCCACGCCAAAGAAACGCGTTGGGGACCCTTTCACGTTCTCTCGAGTGTCCAGTCCTCTGCCATCGGCGCTTGATCCCGTTGCTGCCTCTCTTCCTCTACCATTCAGCCTTCCAGCCAAATTGACAAATGGGGTGGACCTTCCAACATTTGGTTCCCCCACGAGGACTAACAGCATCAACAATGGTATTGTTGCTTCAAATGGACTTGGCCTTTCAGATTCTTACTCATCCAGAATTTCAATCCAGCAAAAGGAGTTGAAAAAGGATTTAAAACCTTACCGACAAAGTCTTCTATCACAGGAGTTTTCAAACTCGAGCACATCTGATAAAGCAGACAAAGGAAGCATCATGAAACAGGACATATCTATTAGTGAAGTTTCGCCTGCTTCTAGTAATGGTCAATTCCATTTCTCAATATACAAATGGGCCAGTAAAGATGTGCCAATGGTGATGTCTCTTAGGACAGAAAGAGCCTCCAAGGCTAAGGATAAGCTTAAACTTGAGAAATGCTCAAGTGCTAAAGAAAGGGTGGTCAGTGAGATCACCACACAAAAACCTATGGCATATGATTCCTCTGTCATGAATAATGGAAAAGAAAACGTATCAACTACTTCCACAGCCACTGAAAATGGAGCAGACTCAAACCAGATTGTAGAACAAATAGTTTCTGCCAAGGCTCAATCACATATTACCCTAGATGTTCCCGCTAGTTCTACCCCGGGTGACGCTAGAGCAGTATCAAGTACTCATTCTGCAGGCGAGAACGGCTTCTCTGGAAAAACTGAGACAGGAAGGGATACTCAGAAGGTTGAGTCCAAACCTTTACAGTTTCTGTTCAAAGAAAATGATAAGAAACAAGATAATAGTCAGATGATTACAAGGGAGAAAGAAGAAAACAGGATGAAAAGCACAAAAAAATTGTCTGCTGTTTTTGATGTTACCGAGAATCCCATGAAACAAGTAGAAAAGACAGTTTCCGCAATAGATGTAGGACATAGCAAAGCCACTTCCCAGGGTTCAGTGAGCTTAGGTGAGAATAAGGGGAAAGGCCTAGTTAAAGGAAAGGTCAAAGAATTCGCTCGAATTTTCAACCAAGAAACTGCAACAAAACCGAAAGTTGACTCCAAATCTCGACCTCAGGGCTCTACATACAAGCAGAGAGATGCTTTAAGAACAAAGAATGACGTTGAAAGTGGGCCTGAACAATCCAAGAAGGAGAACTCTACTGTAGAGACTACCAACATATCTGCTGATGATATGTCAAATCAAGAGGATATGTCAGAATCAGAAATTCCTGATATATCATTTACTGTTATCGGAGATAAAGACGAGTGCTTCCACGGGGGTTTCATGATACAAGTATTATCCCAAGATGAGGGCGAGGACTTACAAAATCAAGAAATTCAAATGATTGACAAGAAGATAAAACAGTGGTCTAAAGGGAAGGAAGGAAACATACGATCCCTGCTATCGACATTACAACATGTACTTTGGAAGGAGTGTGGATGGAAGCATGTGCCTCTTGTTGATATAATTGAAGGGAACGCGGTAAAAAGATCTTATCAAAGAGCTTTACTCTGCTTGCATCCCGATAAGTTGCAGCAAAAGGGTGCTTCTTCAGACCAGAAATATATTGCAGAGAAGGTTTTTGATATTTTACAGGAGGCATGGACTCAATTCAATATGCTCGGTGCACTGTAA	2067	0.4311	METIYSSQRESVLLGYNNNISYENGNNSLIRRSSSTNSNLEVDFNDVFGGPPRRSSLSEARQSLTELKDWSEEEGESGWCRWPPEREKPVFGEDIGNRRRHGNKNNDFFDDIFGGEESASVCSTPKKRVGDPFTFSRVSSPLPSALDPVAASLPLPFSLPAKLTNGVDLPTFGSPTRTNSINNGIVASNGLGLSDSYSSRISIQQKELKKDLKPYRQSLLSQEFSNSSTSDKADKGSIMKQDISISEVSPASSNGQFHFSIYKWASKDVPMVMSLRTERASKAKDKLKLEKCSSAKERVVSEITTQKPMAYDSSVMNNGKENVSTTSTATENGADSNQIVEQIVSAKAQSHITLDVPASSTPGDARAVSSTHSAGENGFSGKTETGRDTQKVESKPLQFLFKENDKKQDNSQMITREKEENRMKSTKKLSAVFDVTENPMKQVEKTVSAIDVGHSKATSQGSVSLGENKGKGLVKGKVKEFARIFNQETATKPKVDSKSRPQGSTYKQRDALRTKNDVESGPEQSKKENSTVETTNISADDMSNQEDMSESEIPDISFTVIGDKDECFHGGFMIQVLSQDEGEDLQNQEIQMIDKKIKQWSKGKEGNIRSLLSTLQHVLWKECGWKHVPLVDIIEGNAVKRSYQRALLCLHPDKLQQKGASSDQKYIAEKVFDILQEAWTQFNMLGAL*	689

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu9g0585	688	MobiDBLite	consensus disorder prediction	489	551	-	-
	Pvu9g0585	688	PANTHER	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	1	682	-	-
	Pvu9g0585	688	MobiDBLite	consensus disorder prediction	527	551	-	-
	Pvu9g0585	688	MobiDBLite	consensus disorder prediction	510	526	-	-
	Pvu9g0585	688	MobiDBLite	consensus disorder prediction	312	335	-	-
	Pvu9g0585	688	MobiDBLite	consensus disorder prediction	355	397	-	-
	Pvu9g0585	688	MobiDBLite	consensus disorder prediction	490	509	-	-
	Pvu9g0585	688	MobiDBLite	consensus disorder prediction	355	385	-	-
	Pvu9g0585	688	MobiDBLite	consensus disorder prediction	48	68	-	-
	Pvu9g0585	688	PANTHER	J DOMAIN-CONTAINING PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1	1	682	-	-
	Pvu9g0585	688	Gene3D	DnaJ domain	583	687	IPR036869	-
	Pvu9g0585	688	SUPERFAMILY	Chaperone J-domain	581	682	IPR036869	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu9g0585	Pvu-Chr9	10404008	10412322	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu9g0585	9	10404008	10412322	Pvu9g0585	9	10404008	10412322	ECH
	Pvu1g0133	1	1098268	1104583	Pvu9g0585	9	10404008	10412322	PCT