Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0577 ATGGCGCGGTGCACCTCATGCGCGCTGTCCAGATTTCATTGCAAGCTTAGATTTGTGGTGGTTGTTTTCTTGATTATATTGATATTGGCGTGGGTGGAGGCCCACGATGCAAATCTCCACGAAAATCAAGTTCACGGAGGCATGGAGAGGAATACCAAGAACATTGCCTCTCACTCTTGCATACACGATCAGATTCTTGAACAGAGGAAGCGACCTGGACGCAAGGTGTATTTAGTTACTCCACAGGTTTATGAGCCCAGTCTTTTGAAACACCTTCAGCACAAAGGTAGGGCATTACTAGATGTGTCAACTTCATCAAGTTCTCATGAGGATGCAAAGAAGCCTATCAGGATATATCTAAATTATGATGCTGTTGGCCACTCCCCTGACAGGGATTGTCGAACAATTGGCGATATTGTTAAACTCGGGGAGCCTCCCATGACTTATCCTCCTGGTTTTCCTTCTTGTGACCCCCATGGAAATCCTCCAATATTTGGTGATTGTTGGTATAACTGCACTTCTGAAGATATTTCAGGAGAGGACAAAAAACATCGCCTTCGTAAGGCATTAGGTCAGACAGCTGACTGGTTTAGGAGAGCATTGGCGGTTGAACCTGTCAAGGGGAACTTGCGTTTAAGTGGGTATTCTGCATGTGGACAAGATGGAGGTGTGCAGCTTCCTCGTGGATATGTTGAGGAGGGTGTCTCTGATGCTGACTTGGTTCTTTTGGTGACTACAAGACCTACAACTGGAAATACACTTGCCTGGGCAGTGGCATGTGAGCGAGATCAATGGGGTCGTGCTATAGCTGGACATGTTAATGTTGCGCCTCGGCATTTGACTGCTGAGGCAGAGACTTTACTTTCCGCTACCCTTATACATGAGGTTATGCATGTTCTTGGTTTTGATCCACATGCCTTTGCTCATTTTAGAGATGAAAGGAAAAGACGGCGTAATCAGGTTACCGAACAAGTTATGGATGAAAAACTTGGACGAATGGTAACACGTGTGGTGCTTCCTCGCGTTGTCATGCATTCTCGGTCTCATTATGCGGCGTTCTCTGGGAATTTTTCTGGTTTAGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGATCTCATTGGGAAAAAAGGCTTCTGATGAATGAAATTATGACTGGTTCTGTGGATACAAGATCTGTTGTTTCAAAAATGACATTAGCTTTACTAGAAGATAGTGGATGGTACAAAGCCAACTATAGTATGGCAGACCGTCTCGATTGGGGTCTCAACCAAGGTACTGAGTTTGTTACATCCCCTTGCAATCTTTGGAAGGGAGCCTATCGTTGCAACACAACACAGTTTTCTGGTTGTACATATAACAGGGAGGCAGAGGGATACTGCCCCATCCTAACTTATAGTGGAGATCTCCCTCAGTGGGCTCGGTATTTTCCGCAAGCTAATAAGGGTGGACAATCCTCATTGGCTGATTATTGCACTTATTTTGTTGCTTACTCTGATGGATCATGTACAGACACTAACAGTGCACGAGCACCTGATAGAATGCTAGGTGAAGTCAGAGGAAGTAACTCTAGGTGTATGGCTTCATCACTAGTACGGACAGGCTTTGTACGGGGTTCTATGACCCAGGGAAATGGTTGTTATCAGCACAGGTGTATGAATAATTCTTTAGAGGTTGCAGTGGATGGTATCTGGAAAGTGTGTCCTCAAGCTGGTGGACCCATTCAGTTCCCTGGCTTTAATGGTGAATTAATCTGCCCTGCCTACCATGAGCTGTGTAACACTGACCCAGTAGCAGCTGTGTCTGGTCAATGCCCTAATTCATGTAATTTCAATGGAGATTGTGTTGATGGAAAATGCCGATGCTTTCTTGGATTTCGTGGGAATGATTGCAGTAGACGTTCCTGCCCCAGCAAATGCAATGGCAATGGAATGTGCCTTTCCGATGGGATTTGTGAATGTAAACCTGGCCATACTGGCATTGATTGCTCCACTGCTGTGTGTGACGAGCAATGCAGCCTTCATGGCGGGGTTTGTGATAATGGGGTTTGTGAATTCCGCTGTTCTGACTATGCGGGTTATACATGCCAGAACAGCTCCATGCTCCTCTCTAGTCTTTCTGTCTGCAAAAATGTGCTGGGAAATGATGTTTCTGGGCAGCATTGTGCGCCCAGTGAGCCTAGCATACTTCAACAGCTGGAAGAAGTAGTTGTCATACCCAACTACCATCGATTATTCCCTGGAGGTGCTAGGAAATTATTTAATATATTTGGCAGCACCTACTGTGATGAAACTGCTAAACGTCTTGCCTGCTGGATTTCAATCCAGAAGTGTGAGAAGGATGGAGATAACAGGCTTCGGGTATGCCATTCTGCATGCGAATCTTATAATCTGGCATGTGGAGCTTCACTTGATTGCTCTGATCAGACCCTTTTCAGCAGTGACGGGGTAGGGGAGGGTCAATGCACTGGCTCTGGTGAGATGAAAATGTCATGGTTTAATCGTCTACGAAGCACTTTTTCTTTGAGAAATAGTTCCTTGAAAGGAATATCTGTAAGATATAGGCAGCTTTAA 2574 0.4549 MARCTSCALSRFHCKLRFVVVVFLIILILAWVEAHDANLHENQVHGGMERNTKNIASHSCIHDQILEQRKRPGRKVYLVTPQVYEPSLLKHLQHKGRALLDVSTSSSSHEDAKKPIRIYLNYDAVGHSPDRDCRTIGDIVKLGEPPMTYPPGFPSCDPHGNPPIFGDCWYNCTSEDISGEDKKHRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYVEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRNQVTEQVMDEKLGRMVTRVVLPRVVMHSRSHYAAFSGNFSGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGLNQGTEFVTSPCNLWKGAYRCNTTQFSGCTYNREAEGYCPILTYSGDLPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCMNNSLEVAVDGIWKVCPQAGGPIQFPGFNGELICPAYHELCNTDPVAAVSGQCPNSCNFNGDCVDGKCRCFLGFRGNDCSRRSCPSKCNGNGMCLSDGICECKPGHTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLGNDVSGQHCAPSEPSILQQLEEVVVIPNYHRLFPGGARKLFNIFGSTYCDETAKRLACWISIQKCEKDGDNRLRVCHSACESYNLACGASLDCSDQTLFSSDGVGEGQCTGSGEMKMSWFNRLRSTFSLRNSSLKGISVRYRQL* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0577 857 Gene3D Leishmanolysin domain 3 437 496 - -
Pvu9g0577 857 ProSiteProfiles EGF-like domain profile. 632 664 IPR000742 -
Pvu9g0577 857 Gene3D Leishmanolysin domain 4 498 593 - -
Pvu9g0577 857 Gene3D Leishmanolysin , domain 2 309 434 - -
Pvu9g0577 857 ProSitePatterns EGF-like domain signature 1. 652 663 IPR000742 -
Pvu9g0577 857 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 2 829 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Pvu9g0577 857 Gene3D Laminin 633 701 - -
Pvu9g0577 857 PRINTS Leishmanolysin (M8) metalloprotease family signature 244 273 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Pvu9g0577 857 PRINTS Leishmanolysin (M8) metalloprotease family signature 397 426 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Pvu9g0577 857 Pfam Leishmanolysin 170 595 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Pvu9g0577 857 Gene3D Laminin 604 632 - -
Pvu9g0577 857 Gene3D - 108 299 - -
Pvu9g0577 857 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 2 829 - -
Pvu9g0577 857 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 111 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0577 Pvu-Chr9 10307921 10316464 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0577 9 10307921 10316464 Pvu9g0577 9 10307921 10316464 ECH
Pvu1g0170 1 1381390 1390817 Pvu9g0577 9 10307921 10316464 PCT