Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0573 ATGGCGAAATCGAGCGCCGACGATGCCGAGCTCCGGCGAGCGTGCCAGCTCGCAGTTGAGGGCACCAGACACAAGGTCGTTTTCTCCATTCGGACCGTCAAGACTCACGGCACGTGGGGAAAATCTGCTAAGCTTGGTTGTCAAATGGCTAAGCCTAGGGTTCTCGCTCTATGCACAAAAGCGAAAGGTCAGCGGACAAAAGCTTTTCTTCGTGTTTTAAAGTATTCAACAGGAGGGGTGCTTGAGCCTGCTAAGTTATACAAGCTGAAGCACCTCTCAAAAGTGGAAGTTGTAATAAGTGACCCCAGTGGATTTACATTTACACTGGGGTTTGATGACCTTAGAAGCCAGAGTGTGGCTCCTTCACAGTGGACAATGCGCAATACCGATGACAGAAATCGCCTCCTGCTTTGTATCTTAAATATCTGCAAAGATGTCCTGGGTCGCTTACCTAAGGTTGTTGGTATTGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCTGCAGTTTCCGCTCAAAGTAACCAACAAGGTGGTGCTTCTATTGAATCTTCTGTGACTGAAACAGAATTGAAAGTCTATGTTGAAAAGGAACTTGTCTCCCAGGCAGAGGAAGAGGACAAGGAGGCTCTTCTGAGAACTTATATCATGGGTGTTGGTGAAGCAGAGGCATTTTCTGAAAGGTTAAAAAGAGAGCTCCAGGCTCTGGAAGCAGCAAATGTGCATGCCATTTTAGAAAGTGAACCTTTGATAGATGAGGTGTCGCACGGGCTTGAATCAGCAACAAATTGTCTGGAAGACATGGATGAATGGTTAGGCATGTTCAACATAAAACTTCGACACATGAGGGAAGATATTGAATCAATTGAAACCCGCAATAACAAGTTGGAAATGCAAAGTGTAAATAACAAAACTCTTATGGAAGAGCTTGATAAGCTTCTTGAGCAATTGAGTATCCCTTCCGAGTATTCAGCATGTTTGATAGGAGATTCATTTGATGAAGCACAAATGCAGCAAAACATAGAAGCATGTGAGTGGTTGACAACTGCCTTGCGTGGTCTAGAAGTGCCTAACATAGATCCTATTTATGCAAAAATGAGAGGAGTTAAAGAGAAACGAGGAGAACTTCAAATAATAAAGTCTACTTTTGTTGGAAAAGCTTCTGAGTACATGAGAAGTTACTTTGCTACTTTTGTGGACTTTATGTTGAATGATAAAAATTACTTTTCTCAGCAAGGGCAGTTGAAAAGGCCGGATCATGCTGAATTGAGGTTCAAGTGCAGTACATATGCACGCCTTCTTAAGCATTTAAAGATTCTTGATAAGAATTGTTTGGGTCCACTGAGAAAAGCTTATTGCAGTTCCCTAAACTTGCTTCTTCGCAAAGAGGCACGCGAATTTGCTAATGAACTTCGTGTTGGTGTGAAAACTTCTAAAACCCCCTCTGTTTGGTTTGAAGTCTTTACTGGTTCTGGTCAAAATGTAAATCTTGCTGATACGGCAACAGTTTCTGAAGCATACGCAAAGATGCTCACAATTTTTATTCCACTTCTGGTGGATGAGAGCTCCTTTTTTGCACACTTCATGTGCTTTGAAGTTCCTTCAACCATTGATGGTAATAAAATTAAACACAATGAGGATAATGATGATAGTAAAAGTGTTATGGTGGATATTGCAGCTTTAAATGAATCACTTCAGGATTTGTTTGATGGAATTGAAGAAGAATTCTCTGCTGTTGTGGACTGGGCATACAAGATTGATCCTTTGTGCTGCATATCAATGCATGAAACTACAGAGCGCTGTCTCTCTAGTCAGAAAGCTGATGCAGCAGGATATGTACGTATTTTGCTTGATGACCTAGCGTGTCACATATATATGCAGTTCAACCGGTTTGTGGATAATGCTTGCCATCAAATTGAAAGAAATGAGCGCAATGCTCGCCAAACAGGTGTCCTACCATACATTCCTAGATTTGCATCCCTTGCAACAAGGATGGAGCAGTATGTTGCAGGACAGTCGAGGGATTTGGTTGACCAAGCATATACAAAATTTGTCAACATAATGTTTGAAACTTTAAAAAAAAATTCAAAAGCAGATCCGAAGAATCCAGATATTTTTCTTATAGAAAACTATGCCGCATTTCAGAATAGTTTGTATGACCTTGCACGTGTTGTGCCCACTTTAGCGAAGTTTTATAATGAGGCTATTGAAGCCTACGAGCAAGCTTGTACACGCCATATTAGTATGATTATCTACTCTCAATTTGACCGCCTTTTCCAGTTTGCTCGAAACATCGAGGACTTGATGTTGAATAATGTTGCAGCTGAAGAGATTCCTTTCCAAGTTGGGCTGTCAAGAGTGGATCTACGGAAGACGTTAAAGTCCAGTTTATCCGGGTTTGACAAGTCCAGTGCTGCCATGTATAAGAAGTTGCAGAAAAATTTGACTTCGGAGGAACTGTTACCTTCCTTATGGGATAAATGCAAGAAGGATTTTCTTGATAAGTACGAAAGTTTTGTCCAACTTGTTGCCAAGATATACCCTGCTGAGTCTGTCCCTTCTGTGGCGGAGTTGCGACACCGTATATAG 2595 0.4162 MAKSSADDAELRRACQLAVEGTRHKVVFSIRTVKTHGTWGKSAKLGCQMAKPRVLALCTKAKGQRTKAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVVISDPSGFTFTLGFDDLRSQSVAPSQWTMRNTDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWAKENTPAVSAQSNQQGGASIESSVTETELKVYVEKELVSQAEEEDKEALLRTYIMGVGEAEAFSERLKRELQALEAANVHAILESEPLIDEVSHGLESATNCLEDMDEWLGMFNIKLRHMREDIESIETRNNKLEMQSVNNKTLMEELDKLLEQLSIPSEYSACLIGDSFDEAQMQQNIEACEWLTTALRGLEVPNIDPIYAKMRGVKEKRGELQIIKSTFVGKASEYMRSYFATFVDFMLNDKNYFSQQGQLKRPDHAELRFKCSTYARLLKHLKILDKNCLGPLRKAYCSSLNLLLRKEAREFANELRVGVKTSKTPSVWFEVFTGSGQNVNLADTATVSEAYAKMLTIFIPLLVDESSFFAHFMCFEVPSTIDGNKIKHNEDNDDSKSVMVDIAALNESLQDLFDGIEEEFSAVVDWAYKIDPLCCISMHETTERCLSSQKADAAGYVRILLDDLACHIYMQFNRFVDNACHQIERNERNARQTGVLPYIPRFASLATRMEQYVAGQSRDLVDQAYTKFVNIMFETLKKNSKADPKNPDIFLIENYAAFQNSLYDLARVVPTLAKFYNEAIEAYEQACTRHISMIIYSQFDRLFQFARNIEDLMLNNVAAEEIPFQVGLSRVDLRKTLKSSLSGFDKSSAAMYKKLQKNLTSEELLPSLWDKCKKDFLDKYESFVQLVAKIYPAESVPSVAELRHRI* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0573 864 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 49 144 IPR028258 -
Pvu9g0573 864 SMART Sec3_PIP2_bind_2 48 146 IPR028258 -
Pvu9g0573 864 Pfam Exocyst complex component Sec3 505 850 IPR019160 GO:0000145|GO:0006887
Pvu9g0573 864 Pfam Exocyst complex component Sec3 224 484 IPR019160 GO:0000145|GO:0006887
Pvu9g0573 864 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 862 - -
Pvu9g0573 864 Coils Coil 221 248 - -
Pvu9g0573 864 Coils Coil 281 318 - -
Pvu9g0573 864 PANTHER SEC3/SYNTAXIN-RELATED 1 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0573 Pvu-Chr9 10257457 10277148 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0573 9 10257457 10277148 Pvu9g0573 9 10257457 10277148 ECH
Pvu1g0182 1 1483323 1499693 Pvu9g0573 9 10257457 10277148 PCT