Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu9g0199 | ATGCTTGATTCGGTTCTTCTCGCGCTTTTCTTGCCGTGCCTCGGCATGAGCGCGGTTTTCATCGTCTACATGTGCCTTCTTTGGTACGCCACCACCAGACACCAACCCCTCCGTAACGGGGTGCCGGTGAAGCAGGTCGCTGACAAGGGTCTGTCTGCTTTGGAGTTGGAGAAGCTTCCCAGAATCACCGGTAAAGAACTGGTCTTGGGCACCGAATGCGCCGTCTGCCTGGACGAGATCGAGGGAGAGCAACCGGCCAGAGTGGTCCCCGGTTGCAACCACGGCTTCCATGTCCATTGCGCCGACACCTGGCTCTCTAACCACCCACTCTGCCCCGTTTGTAGAACCAAACTCGACCCCCAGCTTTTCACTTCCCATAGCCCCTGCTGA | 390 | 0.5795 | MLDSVLLALFLPCLGMSAVFIVYMCLLWYATTRHQPLRNGVPVKQVADKGLSALELEKLPRITGKELVLGTECAVCLDEIEGEQPARVVPGCNHGFHVHCADTWLSNHPLCPVCRTKLDPQLFTSHSPC* | 130 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu9g0199 | 129 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 39 | 121 | IPR013083 | - | |
| Pvu9g0199 | 129 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 1 | 126 | - | - | |
| Pvu9g0199 | 129 | SMART | ring_2 | 73 | 114 | IPR001841 | - | |
| Pvu9g0199 | 129 | Pfam | Ring finger domain | 72 | 115 | IPR001841 | - | |
| Pvu9g0199 | 129 | ProSiteProfiles | Zinc finger RING-type profile. | 73 | 115 | IPR001841 | - | |
| Pvu9g0199 | 129 | SUPERFAMILY | RING/U-box | 72 | 121 | - | - | |
| Pvu9g0199 | 129 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL23 | 1 | 126 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu9g0199 | Pvu-Chr9 | 3636672 | 3637999 | Wgd |
Event-related genes