Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0161 ATGGATCGACGCTGGCCTTGGAAGAAAAAATCCTCGGAGAAGGCTGTGATTGAGAAAGCAGCTACTGCATTGGATTCCTCCGATGCTTCCAACAACCAGGATAACAAGAAACCAAACTACATCCAAATCTCTGCGGAATCCTACTCACATCTGTCTAGCGTGGAGGATCAAGTGAAGACATATGAGGAAAAAGTTCAGGAACTGGAGGATGAGTTCAAGGAAATTAATGAAAAGCTGTCCGCGGCAAACTCCGAGATAAATACCAAGGAAAGCATGGTAAAGCAGCATGCTAAAGTTGCTGAAGAAGCTGTATCAGGCTGGGAAAAAGCTGAAGCTGAGGCTTTGGCATTGAAGAATCATCTAGAATCTGTCACTCTTTTAAAACTCACTGCCGAGGATCGTGCAACACATTTAGATGGCGCTCTTAAAGAGTGTATGCGACAAATACGAAACCTTAAGGAAGAACATGAGCTGAAAATACAGGACGTTGCTCTCTCAAAAACCAAGCAATTAGACCAGATTAAGGGGGAGCTCGAGGCGAAGATAGTGAATTTTGAACAGGAACTTCTTAGGTCTGCTGCTGAAAATGGGGCCCTGTCAAGGTCATTGCAGGAGCGCTCTAACATGCTAATCAAATTAAGTGAAGATAAGGCTCGTGCTGAGGCTGAAATTGAGCTTCTTAAGGGCAACATAGAAGCATGTGAAAGGGAAAATAATTCACTTAAATATGAGCTACATGTTGTTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAAAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCAGATGGAGGGTGTAAAAAAAATTGCTAAGTTAGAGGCTGAGTGCCAAAGACTACGTGGTCTTGTAAGAAAAAAGTTACCTGGTCCTGCTGCACTTGCACAGATGAAACTAGAAGTTGAAAGCCTTGGCCGAGATTTTGGAGAGAGTCGATTAAGGAAGTCCCCTGTGAAGGCTGCTTCCCCTAATTTGTCTCCATTACCCGATTTCTCCCTGGACAATGTGCAGAAATTCCAGAAGGATAATGAATTTCTTACTGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCCTTGGCTAAACGTAACAGTGAGTTGCAGGCCTCAAGGAGTATGTGCGCTAAAACACTGAGCAAACTTCAAAGTTTGGAAGCACAACCTCAGACAAGTAACCAGCTGAAAGGATCTCCAAAATCCATCGTCCAGATAACTCACGAAAGCATTTATAATCAAAATGCAAGCAGTGCACCAAGCTTGGTCTCCATGTCTGAAGATGGAAATGACGATGCAGTAAGTTGTGCTGAATCTTGGTCTACAGCAATAGTTCCTGGGCTATCCCAATTTCCTAAAGAAAAGTGCACTGAGGAATCAAGCAAATCTGAAGTCTCTAATAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAGTTGGCTCGTTTGTCAAATGATTCCATTGTAGACGCCACTGTTTCAGTTTCTTCAAACAATAAGACAACTGACATTGTGAATGGTGATGTATCCGAAGTCAGTATTGGCAACGAAGGTCTGTCTGAAAAAATTGGCAATTCGAATCCATTGTCAAATCAAGTTTCTTCTGATGCTTTGATGTCAGCACCTTATCCTCAATCTGATGCTAGTGGCTTGATATTAACAGAACTTAGATCAAGAATATTACTGGTTTTTGAGTCCTTAGCCAACGATGGTGACATAGGGAAGATTGTGGAAGATATTAAACATGTGCTTGAAGATTCGCATGACATTACTATCCGCCACTCGGTGGATGCCCATCCTTCTGATGCTACGTGTGATAGGAAGGATGATCCTGAAGATGCTGGCTTAAACCTTGAAAAGGACATCATTTCATCCCAGCAACCCAGAGAATATGTGCGTATAACTTCAGATTTGGAAGCTGCAATTTCTCAGATTCATGACTTTGTGCTGCTCCTTGGCAAGGAAGCAGTGACATTTCATGACATATCTTGTGATGGAAATGAAATGAGGCAAAAGATTGAGGAGTTCTCCATCACATTTGATAAAATATTAAACAACAATGCAAGTTTGCTACAGTTTGTTCTTGACCTGTCCTATGTTCTGGATAAAGCAAGTGAGTTCAGATTTAATGTTCTTTGCTACAAGGGCACAGAAGTTGAGAGTAACAGTTCTGATTGCATAGATAAGATTGCTTTGCCTGAAAATAAGTTAGTACAAGACAATTCATCCAGAGAAAGATATCAAACTGCCTGTTCCCATATTCATAGTTCGTGTTCTAATCCTGAGATTCCCGATGATGAAAATTTGGTCTCAGGCTATAGAGTGGATGCTGCATCACAAAAACTGTCAATGCAAGAGTTTGAAGAATTGAAACTAGAGAAAGAAAAAGTATTGACTGATCTGTCAAATTGTACTGAAACTCTTGAAATAACCAAGTCTCAGTTGCTAGAGACTGAACAACTTCTAGCCGAAGTTAAATCACAATTGGCTTCTGCTAAAAAATCAAATTCCTTGGCTGAGACGCAGCTAAAGTGTATGGCAGAATCGTACAATTCTCTTGAAACACGTGCCCAGGTCTTGGAAACTGAGATGAACCGTCTGCAAATTAAGATAGAATCTCTGGAGAATGAACTTCAAGATGAAAAGAAGGCTCATGAAGCTGCTTTGGCTCGGAGCAAGGTTCTAGAAGAGCAGTTACAAAGGATTGAGTACTCGGCAGCTGATGATGACATCAAGACTCCGCATGATAGAGATTTGACAGCTGCTGCCGAGAAGCTAGCCGAGTGTCAGGAAACCATATTTCTTCTGGGCAAGCAGTTAAATGCTCTACGTCCACAAACTGAGTCAATTGATTCATCGTACAGTAAGACAAATCCAAAGGATGAAGGATTCACAGAAGATGAACCTGCCAACAATAGCCCAAAATTTCAAGAATTAGGTCAGATGGAAATGGACAATGCTACTTCTGCTTTTGTGCAAAGATTGAGTTCGGAGTCTCCCTTACAATTTCCCAACAGTTTATTTAGCCCTTCGGACAGTGAGTCCACCCTTCCAGCCAGATCCCCAGTACAGCATTCTAAATCAAAACCAAAACACAGGCCCACCAAGTCAGCCTCTTCTTCAGTTCCCTCTGCCACTACACCAGAAAAGCATGCACGGGGATTTAGTAGATTCTTTTCACCAAAAGGAAAGTCCGGTCATTAA 3243 0.4175 MDRRWPWKKKSSEKAVIEKAATALDSSDASNNQDNKKPNYIQISAESYSHLSSVEDQVKTYEEKVQELEDEFKEINEKLSAANSEINTKESMVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLLKLTAEDRATHLDGALKECMRQIRNLKEEHELKIQDVALSKTKQLDQIKGELEAKIVNFEQELLRSAAENGALSRSLQERSNMLIKLSEDKARAEAEIELLKGNIEACERENNSLKYELHVVSKELEIRNEEKNMSMRSAEAANKQQMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDFGESRLRKSPVKAASPNLSPLPDFSLDNVQKFQKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQPQTSNQLKGSPKSIVQITHESIYNQNASSAPSLVSMSEDGNDDAVSCAESWSTAIVPGLSQFPKEKCTEESSKSEVSNKLELMDDFLEVEKLARLSNDSIVDATVSVSSNNKTTDIVNGDVSEVSIGNEGLSEKIGNSNPLSNQVSSDALMSAPYPQSDASGLILTELRSRILLVFESLANDGDIGKIVEDIKHVLEDSHDITIRHSVDAHPSDATCDRKDDPEDAGLNLEKDIISSQQPREYVRITSDLEAAISQIHDFVLLLGKEAVTFHDISCDGNEMRQKIEEFSITFDKILNNNASLLQFVLDLSYVLDKASEFRFNVLCYKGTEVESNSSDCIDKIALPENKLVQDNSSRERYQTACSHIHSSCSNPEIPDDENLVSGYRVDAASQKLSMQEFEELKLEKEKVLTDLSNCTETLEITKSQLLETEQLLAEVKSQLASAKKSNSLAETQLKCMAESYNSLETRAQVLETEMNRLQIKIESLENELQDEKKAHEAALARSKVLEEQLQRIEYSAADDDIKTPHDRDLTAAAEKLAECQETIFLLGKQLNALRPQTESIDSSYSKTNPKDEGFTEDEPANNSPKFQELGQMEMDNATSAFVQRLSSESPLQFPNSLFSPSDSESTLPARSPVQHSKSKPKHRPTKSASSSVPSATTPEKHARGFSRFFSPKGKSGH* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0161 1080 Coils Coil 346 373 - -
Pvu9g0161 1080 MobiDBLite consensus disorder prediction 1014 1080 - -
Pvu9g0161 1080 Pfam Filament-like plant protein, long coiled-coil 89 962 IPR008587 -
Pvu9g0161 1080 Coils Coil 51 85 - -
Pvu9g0161 1080 Coils Coil 821 911 - -
Pvu9g0161 1080 SUPERFAMILY Tropomyosin 794 979 - -
Pvu9g0161 1080 Coils Coil 135 162 - -
Pvu9g0161 1080 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1080 - -
Pvu9g0161 1080 Coils Coil 168 195 - -
Pvu9g0161 1080 MobiDBLite consensus disorder prediction 1014 1036 - -
Pvu9g0161 1080 Coils Coil 203 269 - -
Pvu9g0161 1080 MobiDBLite consensus disorder prediction 959 989 - -
Pvu9g0161 1080 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1080 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0161 Pvu-Chr9 2480636 2486528 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0161 9 2480636 2486528 Pvu9g0161 9 2480636 2486528 ECH
Pvu1g0083 1 642732 648847 Pvu9g0161 9 2480636 2486528 PCT