Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0139 AGGGGAGGCCCACAGAACAAGGAAGAGGGAGAGGTGGGAAAAGGAGATAGCAATAACAACAACAACGGGAATAACCTGTTGTTGTTCAGGAACGAGGAGATCTACAACAAGGGGTTCGAAATATGGCCAGAATCGTATCAGCCTCAAGCTGCACCCCAGAACTTGAGCAACTACTTTGCATTTGGAGTGGGTCCTAGTCGCAGGAACTGCTCGGAGGAGGTTTCACTGTGTGTGTCTGATGAGTCTACGAGATTTGGATTAACTGTCATGAGGTCCGGAGGTGCAGGAAGCAGCGGCATTAACTGTCAGGACTGTGGTAACCAAGCCAAGAAAGATTGTACACATCTCAGATGCAGGACCTGCTGTAAGACCCGAGGGTTTCCGTGTCAAACCCACGTTAAGAGCACTTGGGTTCCCGCAGCCAAACGCCGCGAACGACAACAACAACTCTCTGCGTTGCAGAACCCACAACAATTCCGCGGAGAGAATATTCCCAAACGACATCACAGAGACACTCAACTCGTCTCCGCTCCACAACCCATCGCAGGGTTACAGCTGGGCCAGTTCCCACCTGAAGTGAGCACTTCGGCGGTGTTTCGGTGTGTGAGAGTCAGCGCAGTGGACGCTTCAGATGAACAGTGCGCGTATCAGACCTCTGTCAGCATCGGAGGGCATGTTTTCAAGGGAATTCTCTACGATCAAGGCCCTGAAAGTTCTTACACCAGTGCAGCTACTGAGGGTTCCTCCGGTGGTGATCCCCGACAGCTGGGCTTAATAACCGGCGCAGCCACAGCCACAACAACCAGTGGAAACCACCCATTTGACCCTTCACTCTACCCCGCTCCGCTGAATGCTTTCATGTCTGGTACACAATTCTTCCACCCCCCAAGGTCCTAA 897 0.5251 RGGPQNKEEGEVGKGDSNNNNNGNNLLLFRNEEIYNKGFEIWPESYQPQAAPQNLSNYFAFGVGPSRRNCSEEVSLCVSDESTRFGLTVMRSGGAGSSGINCQDCGNQAKKDCTHLRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQQQLSALQNPQQFRGENIPKRHHRDTQLVSAPQPIAGLQLGQFPPEVSTSAVFRCVRVSAVDASDEQCAYQTSVSIGGHVFKGILYDQGPESSYTSAATEGSSGGDPRQLGLITGAATATTTSGNHPFDPSLYPAPLNAFMSGTQFFHPPRS* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0139 298 MobiDBLite consensus disorder prediction 1 24 - -
Pvu9g0139 298 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 5 296 IPR007818 GO:0003700|GO:0006355
Pvu9g0139 298 PANTHER PROTEIN SHI RELATED SEQUENCE 7 5 296 - -
Pvu9g0139 298 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 101 143 IPR006510 -
Pvu9g0139 298 Pfam Domain of unknown function (DUF702) 99 237 - -
Pvu9g0139 298 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 188 236 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0139 Pvu-Chr9 2162528 2164509 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pvu9g0139 DUF702 5.6e-61 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0139 9 2162528 2164509 Pvu2g1715 2 30900109 30902938 ECH
Pvu9g0139 9 2162528 2164509 Pvu9g0045 9 826504 827586 ECH
Pvu9g0139 9 2162528 2164509 Pvu11g0423 11 3574481 3575740 ECH
Pvu9g0139 9 2162528 2164509 Pvu9g0139 9 2162528 2164509 ECH
Pvu1g0101 1 848256 850126 Pvu9g0139 9 2162528 2164509 PCT