Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0138 ATGGCTACTCCGTCACTCTTCTTCCTCTTCAGTCTCCTCCTTTTCTCCGCCACCTTAGTCATCGCCAATCGGATCGACGGTGAAGACGACCTACTGATCCGTCAAGTTGTGCCGGACGCGGAGGAGCACCTGCTCAACGCCGAGAACCACTTTTCCGCCTTCAAGACCAGGTTTGGCAGGACCTACGCTACGAAGGAGGAGCACGACTACCGCTTCCGCATCTTCAAGAACAACTTGCTCCGAGCGAAGTCGCACCAGAAGCTGGACCCCTCCGCCGTCCACGGCGTCACGAAGTTCTCCGATCTCACTCCGGCGGAATTTAGCCGCCAGTTTCTGGGCTTGAAGCCGCTTCGTCTTCCCTCCGATGCTCAGAAGGCTCCGATTCTGCCGACCAGCGACCTCCCTAGCGATTTTGATTGGCGCGACCATGGAGCCGTCACCGGCGTAAAGAATCAAGGTTCTTGCGGATCGTGTTGGTCGTTTAGCGCCGTGGGGGCGTTGGAAGGTGCTCATTTTCTTTCGACCGGTGAGCTCGTGAGCCTTAGCGAACAACAACTCGTGGATTGTGATCATGAGTGTGACCCGGAAGAGCGTGGAGCATGTGACGCTGGTTGTGGCGGTGGCTTGATGACCAATGCATTTGAGTATTCACTCAAGGCTGGTGGACTAATGCGAGAAAATGATTATCCTTACACCGGAAGGGACCGTGGCCCCTGCAAATTTGATAACAGCAGAATCGCTGCTTCTGTAGCTAATTTCAGCGTTGTTTCCCTTGACGAAGAACAAATTGCTGCTAATCTGGTGAAGAATGGTCCTCTTGCAGTTGGTATCAATGCAATTTTTATGCAGACATATATTGGTGGCGTCTCATGCCCATACATCTGCGGCAAGCACCTGGATCATGGAGTTCTTCTCGTAGGCTATGGTGCTGGTGCTTATGCTCCCATTCGGTTTAAGGAAAAGCCTTTCTGGATCATAAAGAATTCATGGGGGGAGAGCTGGGGAGAAAACGGATATTACAAGATCTGCCGAGGTCACAATGTATGTGGGGTGGACTCGATGGTCTCAACTGTAGCTGCTATACATACTTCTAGCCATTAA 1101 0.5223 MATPSLFFLFSLLLFSATLVIANRIDGEDDLLIRQVVPDAEEHLLNAENHFSAFKTRFGRTYATKEEHDYRFRIFKNNLLRAKSHQKLDPSAVHGVTKFSDLTPAEFSRQFLGLKPLRLPSDAQKAPILPTSDLPSDFDWRDHGAVTGVKNQGSCGSCWSFSAVGALEGAHFLSTGELVSLSEQQLVDCDHECDPEERGACDAGCGGGLMTNAFEYSLKAGGLMRENDYPYTGRDRGPCKFDNSRIAASVANFSVVSLDEEQIAANLVKNGPLAVGINAIFMQTYIGGVSCPYICGKHLDHGVLLVGYGAGAYAPIRFKEKPFWIIKNSWGESWGENGYYKICRGHNVCGVDSMVSTVAAIHTSSH* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0138 366 SUPERFAMILY Cysteine proteinases 48 358 IPR038765 -
Pvu9g0138 366 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 152 163 IPR000169 -
Pvu9g0138 366 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 33 360 - -
Pvu9g0138 366 SMART pept_c1 134 359 IPR000668 GO:0006508|GO:0008234
Pvu9g0138 366 SMART Inhibitor_I29_2 51 107 IPR013201 -
Pvu9g0138 366 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 323 342 IPR025661 -
Pvu9g0138 366 PRINTS Papain cysteine protease (C1) family signature 152 167 IPR000668 GO:0006508|GO:0008234
Pvu9g0138 366 PRINTS Papain cysteine protease (C1) family signature 301 311 IPR000668 GO:0006508|GO:0008234
Pvu9g0138 366 PRINTS Papain cysteine protease (C1) family signature 323 329 IPR000668 GO:0006508|GO:0008234
Pvu9g0138 366 Pfam Papain family cysteine protease 134 357 IPR000668 GO:0006508|GO:0008234
Pvu9g0138 366 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 299 309 IPR025660 -
Pvu9g0138 366 Pfam Cathepsin propeptide inhibitor domain (I29) 51 107 IPR013201 -
Pvu9g0138 366 Gene3D Cysteine proteinases 28 359 - -
Pvu9g0138 366 CDD Peptidase_C1A 135 358 IPR039417 -
Pvu9g0138 366 PANTHER CYSTEINE PROTEASE RD19C-RELATED 33 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0138 Pvu-Chr9 2146871 2148733 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0138 9 2146871 2148733 Pvu9g0138 9 2146871 2148733 ECH
Pvu1g0102 1 857213 859808 Pvu9g0138 9 2146871 2148733 PCT