Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0133 ATGGACCTCGATCCTCGTCAATACGAAAACGTTGCTATAAATGATAATGACATCCACAGTATTGTACTGTCATATCTTATACACAATTGCTACAAAGAATCGGTGGAATCATTCATTACTAGCACTGGGACAAAGCAGCCATCAGATTATTTAGAGGACATGGACAAAAGGAAAAGAATCTTTCACTTTGCACTTGAGGGAAATGCACTCAAGGCTATTGAGCTTACTGAGCAGCTAGCACAGGATATTTTAGAGAAGAATAAGGATTTGCAGTTTGATCTACTAAGCCTTCATTTTGTTGAGCTCGTCTGCTCAAGGAAATGCACAGAAGCTTTGGAGTTTGCTCAGACCAAGTTGGGCCCTTTTGGAAAGGAGCCCAAATATATGGAAAAACTTGAAGACTTTATGGCCCTTCTTGCTTATAAGGAGCCAGAGAAATCCCCAATGTTTCATCTCCTTAGCTTAGAGTATCGGCAACAGGTTGCAGATAGTTTGAATCGAGCTATTCTTGCACACTTGAATCTTCCCAGATACACAGCAATGGAGAGGCTAATACAGCAGACTACAGTTGTTAGACAATGCTTAAGTCAAGAACCTGGCAAGGATGGGCCTCCGCCATTTTCCTTAAAGGATTTTCTCAAAAGTTGA 648 0.4105 MDLDPRQYENVAINDNDIHSIVLSYLIHNCYKESVESFITSTGTKQPSDYLEDMDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKEPKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLNLPRYTAMERLIQQTTVVRQCLSQEPGKDGPPPFSLKDFLKS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0133 215 SMART Lish 14 46 IPR006594 GO:0005515
Pvu9g0133 215 SMART ctlh 53 110 IPR006595 -
Pvu9g0133 215 PANTHER RAN BINDING PROTEIN 9-RELATED 8 214 - -
Pvu9g0133 215 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
Pvu9g0133 215 Pfam CTLH/CRA C-terminal to LisH motif domain 54 192 IPR024964 -
Pvu9g0133 215 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 30 8 214 - -
Pvu9g0133 215 SMART toby_final6 106 201 IPR013144 -
Pvu9g0133 215 MobiDBLite consensus disorder prediction 195 215 - -
Pvu9g0133 215 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0133 Pvu-Chr9 2044053 2047408 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0133 9 2044053 2047408 Pvu9g0133 9 2044053 2047408 ECH
Pvu1g0110 1 942345 944975 Pvu9g0133 9 2044053 2047408 PCT