Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu8g2481 | ATGGTTCTCTCCAAAACGGCCTCGCAGACGGACGTTTCTGTCCATTCAACCTTCGCCTCTCGCTATGTGCGCACTGCTCTTCCAAGGTTCAAGATGGGAGAGCTATCGATCCCGAAGGAAGCGGCGTACCAGATCATCAACGACGAGCTGATGTTAGACGGAAATCCGAGGCTGAACCTGGCGTCGTTTGTGACGACGTGGATGGAGCCTGAATGCGACAAGCTCATTATGGCTGCCATTAACAAAAACTATGTGGACATGGATGAGTACCCTGTCACCACTGAACTCCAG | 291 | 0.5223 | MVLSKTASQTDVSVHSTFASRYVRTALPRFKMGELSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ | 97 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu8g2481 | 97 | PANTHER | GLUTAMATE DECARBOXYLASE | 1 | 97 | IPR010107 | GO:0004351|GO:0006536|GO:0030170 | |
| Pvu8g2481 | 97 | Gene3D | - | 1 | 65 | - | - | |
| Pvu8g2481 | 97 | PANTHER | GLUTAMATE DECARBOXYLASE | 1 | 97 | - | - | |
| Pvu8g2481 | 97 | SUPERFAMILY | PLP-dependent transferases | 15 | 97 | IPR015424 | - | |
| Pvu8g2481 | 97 | Pfam | Pyridoxal-dependent decarboxylase conserved domain | 39 | 97 | IPR002129 | GO:0016830|GO:0019752|GO:0030170 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu8g2481 | Pvu-Chr8 | 55401021 | 55401510 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pvu8g2481 | 1 | 97 | Calmodulin-binding Proteins | AT5G17330 | 89.691 | 1.73e-58 | 185 |
Event-related genes