Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2438 ATGGCTACCAACAAGTTTGCAACCATGCTTCATAGAAACACCAACAAGATGGTGGTGATTCTAGTTTATGCAGTGCTTGAATGGGTCTTGATTGCACTCCTTCTTCTTAACTCTTTGTTCAGTTATCTCATCACGAAGTTTGCCAAATGGGTTGGCCTTCAACCACCGTGTGTTTGGTGTTCAAGGGTTGATCACGTGCTGCAGCAAGAAAATGACGCGCATGTGCACAAGGATCTCGTGTGTGAGGCTCATGCAGCTGAGATTTCCAAGCTCGGTTACTGCTCAAATCATCAAAGACTGGCGGAAACGCACAGCATGTGTGAGGATTGTTTGGCCTCTCGGCCAAACCATCATGAAAATTCCTTTGGAATGAGGCACAGGATCGCTTTCATTTCGTGGGTGAGTAGTCATGGCAAACATGAAAGTGGAGATAGCTTGATTAGAAGGTGCTCTTGCTGCAATGAGAGCTTGAGCAGCCAGCTTTACCCTCCTTATTTGCTATTGAAACCTTCATGGCACGACGAGAATTACACGAGCAAAGGGTCCCTGATTGTTGAAGAGGCAATAGATGATGAAAAAAGTGATAAAGACCTCGAGTTTGAGAGCAACAACGAGGAAGGTCATGATGATGAAGGGGTGGCAGATGAGCATCAGATACTTTCTGATATTGAGAGTTTTATCCTCAGAGAGGTTGCTGAGGATCGTTCAAGTGTTTCAAACTTGCACTCAGATGAAAAGGATGGGGGAAAAGATGAGAAGGAAGATGATCTTACCATTACTGAGCTGGATCCAAGTGCTGATGACAATTTTCCTTGTCAATTCACTTCCACTATGCAGGGTTTACTCTGGGAAGATAGATCACTTGAAGTCATCAATCTGCATTTTGAGAATTATATGGCTTGTGATAGCCGCCGCTTGGTGCCTGTCAAGTTAATAGACCATGTTACCTCTTTGAATTTTGAAACATGCAAACTGGGTGAGGATTTGGGGGAACAAAAGACTCAGACTCAGACCTTTGTTGACGAGTCACCAATTGAAGCACAATCAAGTATCTTAGAAAGGGAAGGATTACTCACATTGGATGAGAATGCAGAGAAAAAAAGTATGAGAGCAGTTGAAAGCTCGGAAAATTCTATAAATTTGGAATTTGAAGGGTTGAAACCGAATTCAGAGATTACCTCTAGGGAAGTTCAGACTTCGCTGAATGATGACAACAGTGTTGAAGCGGCTACTGAAGAACTAGATGATACACAAGTCGATCTGCCTCGATCTCAAGAACCAGTCTGCTCTAGTGACTGCGCACAAGAAGATGAATCTTCATCAAGTGAAGATGATGCTGAAGTTCAAAATGCCTTTGATGAATTCATTTCTCAGAATCATCTTAGTGAGACTCAAAGTTTATCTAATGATGACAACAGTGTGGAAGCAGCTATGCAAGGACCAGAAAGTCCACCAGGAGTTAATCTCCCTCCGTCTCAAGAACCAGCCTGCTCTGTTCAATGCATATCAGAAGACGAATCTTCTTCATCAAGTGATGATGATGCTGAAGTTCAAAACGCCTTTGATGCATTTATTGCTCAGAATCATCTAGTTCAGTCTCAAAGTTTATCCAATGATTATAAAAGTATAGAAGCTGATATGAAAGAACCAGAAAATACACGAGATGATCATCCTCCATCTGAAGAACCAGCTAGCTCATCTCAAAGCGTACCAGAAGATCAATCTACCACAAGTGAGGATGACACTGAAGCTCCAAATGCCTTTGATGATTTCATTGCCCAGAATAATGTCTGTCCAGATAAAAAGCGTGTAAATGATAACGAGTGTTCTAAGATGATTGAGAAAACAGAAGCAGTTGAGAAAAATCATGAAGAAACAAGCAATGAATCTTCCAAATGCTCAGAGCCATATGAAGTAGAAGAAGATAAACTTCCTGAGACTCCTAGATCTGTAGATGGCCTGCAGTACCTGCTTAAAAGAGAACCAGTAGCAGATGATTCTATGGATGGTAGTGTTGCAAGTGAGGTAGAAAGTGGCGATCCAGTATCAACAATTGATCGGCTAAAAACGGTTATAAAATCTGAAAGAATGGCCCTAACAGCTATATATCAAGAACTAGAAGAAGAGAGAAGTGCATCAGCAATAGCAGCCAATCAGACAATGGCAATGATTACAAGGCTGCAGGAAGAAAAGGCAGCAATGCAGATGGAAGCATTGCAGTACCAGAGGATGATGGAAGAACAATCCGAGTATGATCAGGAAGCTTTACAGCTTTTAAATGAGTTGATGATGAAAAGGGAGAAAGAGAAGCAGGGACTTGAGAAGGAGTTGGAAGAGTACAGACAGAAGGTAATGGAATATGAAGCAAAAGAGAAACTGAGGGTGCTGAGAAGAATGAAAGATGGAAGTGTAAGAAGTAGAGACTCCTCTTCTTCTTGCAGCAATATGAACTACAGTGATGATCTATCCATTGATCTTAACCGCGAGGTGCGCGACGAAGATAATGTTTTATTCAACCATGAGGAAAGCAGCCAGAACAATGCATCTGAAGATACAGTTTCTAATTTGGAGGAGATGGCACTAGACTGTGTAAAGCATGTGAGTGCACTTGATGACACATTGGCAGAGTTTGAGGAAGAGAGGGCTTCCATTCTAGAACAGCTCAAAGCATTAGAGGAAAAAATTATTTCATTGGGAGATAACGAGGAACTCCTTGATGAGATCAAATTGATTGAGCAATCATCAATGTATGGCGGTGACAAAGACTTGAATGAGAATGGATATTTTAATGGGTTTTCAGATGATAAACACTCTCCAATAAGTTCCTTGGCAAAGAAGCTACTTCCATATTTAGATGCAGCTGAAAATGAGACTGAGGAAGCATACACACTTGAGAGACAATTGGAATCTGAATCATCTGATATGCAGAACTCAGTTACTATACTTGAAATGGATAGCATGAAGACATCCATTGAAGAGGAGGTTGATCTCGTTTATGAGAGGTTACAAGCTCTTGAAACAGATAAGGAGTTTCTACAACACTGCATGGGTTCCATACAAAATGGTGGAGAGAAAGGAGTGGATTTGCTTCAAGAAATCTTACAGCATCTTCGTGATCTTAAGGATGTGGAACTCCGCCTCAAGACTTTGGGAAATGATCCACTATAG 3168 0.4138 MATNKFATMLHRNTNKMVVILVYAVLEWVLIALLLLNSLFSYLITKFAKWVGLQPPCVWCSRVDHVLQQENDAHVHKDLVCEAHAAEISKLGYCSNHQRLAETHSMCEDCLASRPNHHENSFGMRHRIAFISWVSSHGKHESGDSLIRRCSCCNESLSSQLYPPYLLLKPSWHDENYTSKGSLIVEEAIDDEKSDKDLEFESNNEEGHDDEGVADEHQILSDIESFILREVAEDRSSVSNLHSDEKDGGKDEKEDDLTITELDPSADDNFPCQFTSTMQGLLWEDRSLEVINLHFENYMACDSRRLVPVKLIDHVTSLNFETCKLGEDLGEQKTQTQTFVDESPIEAQSSILEREGLLTLDENAEKKSMRAVESSENSINLEFEGLKPNSEITSREVQTSLNDDNSVEAATEELDDTQVDLPRSQEPVCSSDCAQEDESSSSEDDAEVQNAFDEFISQNHLSETQSLSNDDNSVEAAMQGPESPPGVNLPPSQEPACSVQCISEDESSSSSDDDAEVQNAFDAFIAQNHLVQSQSLSNDYKSIEADMKEPENTRDDHPPSEEPASSSQSVPEDQSTTSEDDTEAPNAFDDFIAQNNVCPDKKRVNDNECSKMIEKTEAVEKNHEETSNESSKCSEPYEVEEDKLPETPRSVDGLQYLLKREPVADDSMDGSVASEVESGDPVSTIDRLKTVIKSERMALTAIYQELEEERSASAIAANQTMAMITRLQEEKAAMQMEALQYQRMMEEQSEYDQEALQLLNELMMKREKEKQGLEKELEEYRQKVMEYEAKEKLRVLRRMKDGSVRSRDSSSSCSNMNYSDDLSIDLNREVRDEDNVLFNHEESSQNNASEDTVSNLEEMALDCVKHVSALDDTLAEFEEERASILEQLKALEEKIISLGDNEELLDEIKLIEQSSMYGGDKDLNENGYFNGFSDDKHSPISSLAKKLLPYLDAAENETEEAYTLERQLESESSDMQNSVTILEMDSMKTSIEEEVDLVYERLQALETDKEFLQHCMGSIQNGGEKGVDLLQEILQHLRDLKDVELRLKTLGNDPL* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2438 1055 ProSiteProfiles GTD-binding domain profile. 683 781 IPR007656 -
Pvu8g2438 1055 MobiDBLite consensus disorder prediction 601 648 - -
Pvu8g2438 1055 MobiDBLite consensus disorder prediction 382 649 - -
Pvu8g2438 1055 PANTHER MYOSIN-BINDING PROTEIN 2 1 1053 IPR039306 GO:0017022
Pvu8g2438 1055 Coils Coil 951 971 - -
Pvu8g2438 1055 MobiDBLite consensus disorder prediction 542 561 - -
Pvu8g2438 1055 MobiDBLite consensus disorder prediction 525 541 - -
Pvu8g2438 1055 PANTHER MYOSIN-BINDING PROTEIN 3 1 1053 - -
Pvu8g2438 1055 Coils Coil 988 1008 - -
Pvu8g2438 1055 MobiDBLite consensus disorder prediction 193 215 - -
Pvu8g2438 1055 Coils Coil 717 790 - -
Pvu8g2438 1055 MobiDBLite consensus disorder prediction 452 476 - -
Pvu8g2438 1055 Coils Coil 867 901 - -
Pvu8g2438 1055 MobiDBLite consensus disorder prediction 391 407 - -
Pvu8g2438 1055 Pfam Zein-binding 687 777 IPR007656 -
Pvu8g2438 1055 MobiDBLite consensus disorder prediction 237 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2438 Pvu-Chr8 54969583 54974363 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2438 8 54969583 54974363 Pvu8g2438 8 54969583 54974363 ECH