Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2436 ATGAAGAGGGAAGGGATGGAAGACGCCAATGCAGTGAAAGGTGAATGTTCAAGCAGTGGGAAGGGGAAGGTGGTGTTTGAGGAAGAAGAAAATGAAGACAGGTTGTTGGCAGGTGTAGGATACAAAGTGTGTTCCTCAAACATGGTTGACGTGGCACACAAGCTCGACCAATTGGAGATGGTAATGGAGGGAGATGGAATGTCCCATCTCGCCAACAACACCGTGCATTACGACCCAACCGATCTCTACGGCTGGGTCCAGAACATTCTCAACAATGCGCCCAATCACATCACCGCAACCAACAACAACAACGCTGTCATTCCATCGCCGTTAATCACCGTCCCCGAGAACGATCTAAGAGCGATTCCATTACCATACATTGAAGCGTATCCCCAACTAGAAAATCAGAATTGCCACAAGCAATTTAAGAGCTCCTCGTCTCTGTTTTCGCCCGCGATATCATCGGACAACGTGCTTCCGGTGGTTCTGATGGAGGAGGCCGGCGTGCATCTCGTCCACTCGCTCATGGCCTGCGCGGAGGCCGTTCAATTCGGAAATGCGAGCCTTGCGGAAGGCCTCGTGAAGCATGCAGGAAACCTTGCTGCGTCGCAAGGAGGTTCAATGGGGAAAGTCGCGTCGTTCTTCGCTCAAGCTCTCGCTAGAAGAATCTACGGCTTCTACCCTCACGAGACTCTAGACTCTTCCTACTCCGACATGCTGCACACACATTTCTACGAATCGAGCCCGTACCTCAAATTCGCGCACTTCACGGCAAACCACGCCATCCTCGAAGCCTTCGCCGCTGCGGACACGGTGCATGTTATCGATTTTGGCCTGAAGCAGGGGTTGCAATGGCCGGCGTTCATGCAAGCGCTCGCGGTCCGTCCGGGAGGTCCACCAGTGTTCCGTCTCAGTGGAATAGGACCGCCGCGGCTCGACGACCCCGATTCCGACACGCTTAGTCAGGTTGGTTTGAAACTGGCGGAACTCGCTCGAAAAGTTAGGATTCAATTCGAGTTCCGCGGATTTGTGTGTAACAGTTTAGCGGATCTAGATCCGTCCATGCTCGAGATCCGAGCCGGAGAATTCGTCGCGGTTAACTCTATCTTCGAGCTTCACCGCCTACTGGCGCGACCGGTTGACATTGAAAAGGTGTTAGAAACGATTAAGAGGATTAAGCCGGAGATTGTTACCGTGGTGGAGCAAGAAGCGAATCACAACAGTCCGGTTTTTCTGGAGCGGTTCACGGAGGCTTTGTACTATTACTCGAGTTTGTTTGACTCGTTGGAGGGATCAGTGGCAGCGTCTAGTGAAGAGGCGTTGGTGATGGCGGAGATGTACTTGGGGAGGCAGATATGTAACGTTGTGGCATGTGAGGGGGATGAACGCGTGGAGAGGCACGAAACGCTGGGTCAGTGGAGGGGGCGGTTCGGTTTGGGAGGGTTCGAAGCGGTTCGTTTGGGTTCGAACGCGTTCAGACAAGCGAGGATGTTGCTGGGCCTATACGCCGAGGGGGGAAAAGGGTATAGAGTGGAAGAAAACAATGGGTGCCTCTTGCTTGGGTGGCACACCAGGCCACTCGTTGCCTCCACCGCGTGGAGACTCGCGCCCAATGGCTTGCGCTGA 1626 0.5394 MKREGMEDANAVKGECSSSGKGKVVFEEEENEDRLLAGVGYKVCSSNMVDVAHKLDQLEMVMEGDGMSHLANNTVHYDPTDLYGWVQNILNNAPNHITATNNNNAVIPSPLITVPENDLRAIPLPYIEAYPQLENQNCHKQFKSSSSLFSPAISSDNVLPVVLMEEAGVHLVHSLMACAEAVQFGNASLAEGLVKHAGNLAASQGGSMGKVASFFAQALARRIYGFYPHETLDSSYSDMLHTHFYESSPYLKFAHFTANHAILEAFAAADTVHVIDFGLKQGLQWPAFMQALAVRPGGPPVFRLSGIGPPRLDDPDSDTLSQVGLKLAELARKVRIQFEFRGFVCNSLADLDPSMLEIRAGEFVAVNSIFELHRLLARPVDIEKVLETIKRIKPEIVTVVEQEANHNSPVFLERFTEALYYYSSLFDSLEGSVAASSEEALVMAEMYLGRQICNVVACEGDERVERHETLGQWRGRFGLGGFEAVRLGSNAFRQARMLLGLYAEGGKGYRVEENNGCLLLGWHTRPLVASTAWRLAPNGLR* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2436 541 SMART DELLA_2 33 103 - -
Pvu8g2436 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 29 534 IPR005202 -
Pvu8g2436 541 MobiDBLite consensus disorder prediction 1 20 - -
Pvu8g2436 541 ProSiteProfiles GRAS family profile. 162 534 IPR005202 -
Pvu8g2436 541 Pfam GRAS domain family 171 534 IPR005202 -
Pvu8g2436 541 PANTHER DELLA PROTEIN RGL1 29 534 IPR030006 GO:0003712|GO:0005634
Pvu8g2436 541 Pfam Transcriptional regulator DELLA protein N terminal 33 92 IPR021914 -
Pvu8g2436 541 Gene3D - 31 92 IPR038088 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2436 Pvu-Chr8 54952632 54955300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2436 24 535 GRAS Transcription Factor Family AT1G66350 57.087 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu8g2436 GRAS 2e-130 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2436 8 54952632 54955300 Pvu8g2436 8 54952632 54955300 ECH
Pvu1g2383 1 49176444 49179604 Pvu8g2436 8 54952632 54955300 PCT