Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1697 ATGACAAATCAACATCCCATTTTGCATTGTACTTTCCTTTTGTTTCTCTTGTACCTTCTACTCAATGCAGCTCCTACGAGTTGCAAGTTCACCATTGAGCCATGCTCTGACGATAACTCGTGCAATGCGCTTCTTGGCTACACCCTTTACACTGATCTCAAGGTCTCTGAGGTTGCTTCTCTCTTCCAAATAGACCCTATTGGACTTCTCACTGCCAATGCCATTGACATCTCGTACTCTGATGTTGAGCATCGCATTCTCCCTTCCAAACTCTTCCTCAAGATCCCTATCACATGTTCCTGTGCTGATGGGATTAGAAAATCAGTGTCTGCCCATTACAGGACTCGTCCTTCTGATACTCTCTCTTCCATTGCAGATTCAGTGTATGGAGGTCTGGTATCCCCTGATCAGCTTAGGGAGGCTAACTCCATAGCTGACCCTTCGGTGCTTGATGTGGATCAGAACCTTGTGGTGCCACTTCCATGCACTTGCTTCAATGGCAGTGATAATTCTTTGCCTTCAATTTACCTCTCCTATGTGGTAAAGCCAATTGATACTCTGGCTGCCATTGCAGCTAGATATTTCACTACACTTACTGATTTGATGAATGTTAATGACATGGGGAGTGCAGCTATCTCTGATGGAGATATTCTTGCTGTTCCAATTCCTGCTTGTGCATCAAATTTTCCAAAATATGCCACTGATTTTGGCTTGCTTGTCCCTAATGGAAGCTATACCATTGCAGCTAGTCACTGTGTGCAGTGTAGCTGTGGACCACAAAATTTAGATTTATACTGTATTCCCTCTTCTCTAGCTGTCTCTTGCTCCAGCATGCAATGCAAAAGAAGCAATCTTATACTTGGGAATGTTACCGTGCAACAGATGAGCTCAGGATGCAATGTGACATCGTGCAATTATGATGGTTTTGTCAATGGCAACATATTAACAACGATGTCCTCATCTCTTGAGCCTCATTGTCCAGGCCCGCGACGATTCCCTCCACTTATAGCGCCACCTACATCTGTTACAAGGGAATCAGTAGTTGCATTTCCTCCATCTCTATCACCATCACAGACACCATTACTGTCACAGTCACCATCATCGCAATCAGAAGGAACAGGTCTAACAGCACCCAAATCTTCAGTCATGCCTGCAACCAGATCATTTCCAGGATTCTCACCTGCAAATGGCCCTGTTGGTAGGATTGCTTCTGCTTCTCCCTCTTTGGCGAATCCTATTCCCATTTGGATGCCCTCATTTATGTTGTTTCTTATAAAGTTGATGATCCCTGTGGCTTTTTAA 1302 0.4432 MTNQHPILHCTFLLFLLYLLLNAAPTSCKFTIEPCSDDNSCNALLGYTLYTDLKVSEVASLFQIDPIGLLTANAIDISYSDVEHRILPSKLFLKIPITCSCADGIRKSVSAHYRTRPSDTLSSIADSVYGGLVSPDQLREANSIADPSVLDVDQNLVVPLPCTCFNGSDNSLPSIYLSYVVKPIDTLAAIAARYFTTLTDLMNVNDMGSAAISDGDILAVPIPACASNFPKYATDFGLLVPNGSYTIAASHCVQCSCGPQNLDLYCIPSSLAVSCSSMQCKRSNLILGNVTVQQMSSGCNVTSCNYDGFVNGNILTTMSSSLEPHCPGPRRFPPLIAPPTSVTRESVVAFPPSLSPSQTPLLSQSPSSQSEGTGLTAPKSSVMPATRSFPGFSPANGPVGRIASASPSLANPIPIWMPSFMLFLIKLMIPVAF* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1697 433 CDD LysM 178 220 IPR018392 -
Pvu8g1697 433 CDD LysM 112 158 IPR018392 -
Pvu8g1697 433 Pfam LysM domain 113 159 IPR018392 -
Pvu8g1697 433 Pfam LysM domain 179 221 IPR018392 -
Pvu8g1697 433 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 3 22 408 - -
Pvu8g1697 433 MobiDBLite consensus disorder prediction 353 388 - -
Pvu8g1697 433 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Pvu8g1697 433 ProSiteProfiles LysM domain profile. 177 220 IPR018392 -
Pvu8g1697 433 Gene3D LysM domain 109 167 IPR036779 -
Pvu8g1697 433 SUPERFAMILY LysM domain 177 222 IPR036779 -
Pvu8g1697 433 SMART LysM_2 178 221 IPR018392 -
Pvu8g1697 433 SMART LysM_2 112 159 IPR018392 -
Pvu8g1697 433 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 22 408 - -
Pvu8g1697 433 MobiDBLite consensus disorder prediction 353 387 - -
Pvu8g1697 433 Gene3D LysM domain 168 229 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1697 Pvu-Chr8 42084014 42086570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1697 12 432 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 61.466 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1697 - - pvu:PHAVU_008G163700g 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1697 8 42084014 42086570 Pvu8g1697 8 42084014 42086570 ECH