Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0335 ATGGTTTCAAATGATGGCAGTAAAGCAAGTGAAATCTTTCGAGGTCAAGTTCACTTGTACAAACACTTGTTTGCCCATACAATAGATGCTATGAGTCTTAAATGGATGGTTGAGCTTAGCATACCAGACATAATCCACAACCATGGTCAACCTATTACATTTCAAAAGTTGGTGTCCATTCTACAAGTTTCACCAACCAAAGTTAGAGGTGTGCAGAGTCTCATACACTACCTAGCACACACTGGATTCTTTGAGATAGTTAGTGTCCATGAGAATATGGAGGAAAAGGAAGCATATGCTCTAACTGCTGCATCACAGCTTCTTGTCAAAGACAGTGACCTTTGTCTAGCACCAACGGTAGAGGGTTTTGTTGACCCAGGTTTAACTGGTGTATGGTCTAACCTGAAGAAGTGGACTTATGAGGATGATCTCACACTATTTGGTGTCTCAGTAGGATCAAATCTGTGGGAATTTCTTGATAAAAATCCTGCATCTGACGAGGCATTCAATGAGACATTGGCTGCTGATTCTAAGATGATGAACATGGCATTGAAAGGTTGCAATTGGGTGTTTGAGGGAGTGGAGTCCATTGTGGATGTTGGTGGTGGAACTGGAATCACAGCCAAGATACTATGTGAGGCATTTCCTAACATGAAATGCATTGTGTTGGAACGTCCAGGTGTTATAGAAAACTTGTCAGGAACCAACAATTTGACATATGTTGGTGGAGACATGTTTAAATCTATTCCAAAGGCTGATGCAGTTCTGCTTAAGTCACAGGTAGCTTTCGCACACTCCCTTTATTTCGTGGCCAAACTCTTCCTGTTGTTTGCTTCCTTCTGCACTTCCCATCACATTCTCACTGTGTCATCATCTTCACAATCACACCCTTCTCCGCGACCACCACATTCTCAGATGGCCTTGCAGACAGCTACTCCTCCAACTACTCCCAGTGCCCAAGTCGTGGGTAATGCATTTGTTGAACAATATTACCACATTCTTCACCATTCACCAGATTTGGTTTATCGGTTTTACCAGGACTCTAGTGTGATAAGCCGTCCTGATTCCAATGGTGTGATGACATCAGTTACAACCATGAAAGGCATTAATGAGAAGATTGTTTCACTAAATTTCAAGGAATTTAAAGCAGAGATAAAGACTGCAGATGCTCAAAAATCATACCAGGAAGGAGTAACTGTGCTGGTGACTGGATGCTTGACTGGCAAGGATAACATGAGAAGAAAATTTGCACAGTCGTTCTTTCTTGCTCCACAAGACAATGGCTATTTTGTTCTTAATGATGTTTTTAGGTATGTAGAAGATGATGAACCATCAGAACTGCCTCCAGTTAATGGAGATGGTGATGCAGCTGCTGTTAAAATAATCCCAGAACCAGAATCCAGTCATGTTGCTGATTCTCCTGCCCCAGACTCCACAAATTCTATTGTGAACAAGGGTCAAATTGTTGTGGAGAAGGCTTATGCTCCATCTAATCATCACGAGAGACAGATACCTGCTGAAAATGAAGACAATGTAGAATCCCATTTTCAGTCAAATGGAAATGATGATTCTCAGGCCACAGAAGTGGATTCTTTAGCCCAGGAGGATGCTCCAAAGCAGTCTTATGCATCAATTGTGAAAGTCCAAAAAGGGAGTTCGGTACCAACTAAAGTTTATGTGCCTACTAATACGCTAAAGTCAGGGTCTAACAAAACTGAGAGCCTGGTAGCTGAGCCAGTAGAATCTAGTGAAGTTCCTGAAGCAGCTTCGGACAGTGTTAACGACCCTGAAAGTAGTGATGCTCATGAGGAAGTTGAAGGACACTCCATTTATATTCGAAATTTACCTTTAAACGTGACTGTTGGTCAGTTGGAAGTGGAGTTTAAGAAATTTGGATCCATCAAGCCAGACGGCATCCAAGTCAGAAATAACAAGCAGCAGGGATACTGTTTTGGCTTTGTTGAGTTCCTATCTCTAAATTCTATGAATAGTGCAATTCAGGCTTCACCTATTCCTATTGGGGGGCGTCAAGCTGTAGTCGAGATAAAGAGAACCACTACTCGAGTTGGCAGTGGCATTAGCAATACTGGAAGACCTAGGATCCCACCCGGTAGGGGTGGATTACGAAATGACTCTTTCAGGGGCCGTGGGAACTACGGCGGCGGTCGCGGATACGGTCGAAATGATTATGGAAACCGTGGTGGTGAGTTTTCTGGTAGAGGTCGCAGTCATGGTGATGGTGAGTTTTCTGGTAGAGGTCGCAGTCATGGTGATGGTGAGTTTTCTGGTAGAGGTCGCAGTCATGGTGAAAGCTATCACCAAGGAAGAGGGAGAGGTGGCCGGTCAAGCGGACCAAAACAGAATGCCGTTGTTTCGAACTGA 2382 0.4349 MVSNDGSKASEIFRGQVHLYKHLFAHTIDAMSLKWMVELSIPDIIHNHGQPITFQKLVSILQVSPTKVRGVQSLIHYLAHTGFFEIVSVHENMEEKEAYALTAASQLLVKDSDLCLAPTVEGFVDPGLTGVWSNLKKWTYEDDLTLFGVSVGSNLWEFLDKNPASDEAFNETLAADSKMMNMALKGCNWVFEGVESIVDVGGGTGITAKILCEAFPNMKCIVLERPGVIENLSGTNNLTYVGGDMFKSIPKADAVLLKSQVAFAHSLYFVAKLFLLFASFCTSHHILTVSSSSQSHPSPRPPHSQMALQTATPPTTPSAQVVGNAFVEQYYHILHHSPDLVYRFYQDSSVISRPDSNGVMTSVTTMKGINEKIVSLNFKEFKAEIKTADAQKSYQEGVTVLVTGCLTGKDNMRRKFAQSFFLAPQDNGYFVLNDVFRYVEDDEPSELPPVNGDGDAAAVKIIPEPESSHVADSPAPDSTNSIVNKGQIVVEKAYAPSNHHERQIPAENEDNVESHFQSNGNDDSQATEVDSLAQEDAPKQSYASIVKVQKGSSVPTKVYVPTNTLKSGSNKTESLVAEPVESSEVPEAASDSVNDPESSDAHEEVEGHSIYIRNLPLNVTVGQLEVEFKKFGSIKPDGIQVRNNKQQGYCFGFVEFLSLNSMNSAIQASPIPIGGRQAVVEIKRTTTRVGSGISNTGRPRIPPGRGGLRNDSFRGRGNYGGGRGYGRNDYGNRGGEFSGRGRSHGDGEFSGRGRSHGDGEFSGRGRSHGESYHQGRGRGGRSSGPKQNAVVSN* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0335 793 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 258 IPR016461 GO:0008168
Pvu8g0335 793 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 258 IPR029063 -
Pvu8g0335 793 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 608 685 IPR000504 GO:0003723
Pvu8g0335 793 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 610 668 IPR000504 GO:0003723
Pvu8g0335 793 MobiDBLite consensus disorder prediction 511 531 - -
Pvu8g0335 793 PANTHER RAS GTPASE-ACTIVATING BINDING-LIKE PROTEIN 306 790 - -
Pvu8g0335 793 ProSiteProfiles Nuclear transport factor 2 domain profile. 322 438 IPR018222 -
Pvu8g0335 793 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Pvu8g0335 793 Gene3D - 588 693 IPR012677 -
Pvu8g0335 793 MobiDBLite consensus disorder prediction 558 577 - -
Pvu8g0335 793 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Pvu8g0335 793 Gene3D Vaccinia Virus protein VP39 109 272 IPR029063 -
Pvu8g0335 793 Pfam O-methyltransferase domain 132 273 IPR001077 GO:0008171
Pvu8g0335 793 MobiDBLite consensus disorder prediction 558 601 - -
Pvu8g0335 793 SUPERFAMILY RNA-binding domain, RBD 602 684 IPR035979 GO:0003676
Pvu8g0335 793 SUPERFAMILY NTF2-like 318 439 IPR032710 -
Pvu8g0335 793 MobiDBLite consensus disorder prediction 511 538 - -
Pvu8g0335 793 CDD NTF2 318 440 IPR018222 -
Pvu8g0335 793 Pfam Nuclear transport factor 2 (NTF2) domain 322 438 IPR002075 -
Pvu8g0335 793 Gene3D - 2 108 IPR036388 -
Pvu8g0335 793 PANTHER RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 306 790 IPR039539 -
Pvu8g0335 793 SMART rrm1_1 609 681 IPR000504 GO:0003723
Pvu8g0335 793 Gene3D - 311 443 - -
Pvu8g0335 793 MobiDBLite consensus disorder prediction 739 775 - -
Pvu8g0335 793 MobiDBLite consensus disorder prediction 291 316 - -
Pvu8g0335 793 MobiDBLite consensus disorder prediction 689 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0335 Pvu-Chr8 2707004 2717206 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0335 8 2707004 2717206 Pvu8g0335 8 2707004 2717206 ECH