Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0209 ATGTTCCCTTCCTCTAACTACACCTCAGGCTCTTACCCTCGTTTCCCTTCTTCTTCGTCTTCTTCTACTTCGCCGTACCCTTCTTTCACTTTCCTTCACCCTGAAAATTCTTCTAGCAGCACCTTTCTCCATGATCCACTTTCTGTTACCTTCATACCAACTAACTACCATGCTCCAATCCCTGAAACGCTAGCCAATTGGGCAGTTGCGGATTATGCTGCTGCGGCAATGCTGAATCAGGATCTCGGCGGCGCTCTTTACGGCATCACCAAAAAGCCGGCGAAGAAAACGACGAAGAAAGACAGGCACAGCAAGATTCACACATCTCAGGGCTTGAGGGACCGGAGGGTGAGGCTGTCGATTGAGATCGCACGCAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGATAAAGCCAGCAACACCCTTGACTGGCTCTTCACGAAGTCCAAGAAGGCAATTAAGGAGCTAACTCGCAGCAAGCACAGTGTCGATAGCTTCGAATTCTCCTCGTCTTCGGATGGAGAAGTGGTTTCTGTGATCCACCAAGACAAAGAACAGCATCAAGGGGTGGACTTGGAAGAGGGGAAGTTGAAGGAACCTGTTTATTGTGTTAAAGCAAAGATGAAGGAATCAAGGGAAAAAGCAAGGGCAAGAGCAAGGGAAAGGACTAGTTGCAAAGGGAAGGTGCAAGAGTTCAACAAAAACTGCCCTGCAACTGAAAACCATCAAATCCTTAACCAATCAAGGAGTGATAGAAATCTTATAGAAGATGTGAATGGAGGAATGACAAGAGATGATGACTTTAATGTTATTGAAGAATCCATTGTCATCAAGAGAAAGTTGAAACACTCTCTGATGTCTTCTATTCATCACCAGAACGCTGTGATCCCTAAGGAAGCAAGTGTGAACAACAGTGACTACCACTCCTTCCCCAATTTGTCGCCAAATTGGGAAGCTAATAGTGCTGCCAATGGACGCTCCACCTTTTGTGCAATAGCCAGCATGAATCTATCTGCAGGGCTTCAAATTTTTGGAAAATCTTGGGAGGAGTGCACCAATCCTCATCCTACCTAA 1077 0.4587 MFPSSNYTSGSYPRFPSSSSSSTSPYPSFTFLHPENSSSSTFLHDPLSVTFIPTNYHAPIPETLANWAVADYAAAAMLNQDLGGALYGITKKPAKKTTKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELTRSKHSVDSFEFSSSSDGEVVSVIHQDKEQHQGVDLEEGKLKEPVYCVKAKMKESREKARARARERTSCKGKVQEFNKNCPATENHQILNQSRSDRNLIEDVNGGMTRDDDFNVIEESIVIKRKLKHSLMSSIHHQNAVIPKEASVNNSDYHSFPNLSPNWEANSAANGRSTFCAIASMNLSAGLQIFGKSWEECTNPHPT* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0209 358 Pfam TCP family transcription factor 97 227 IPR017887 -
Pvu8g0209 358 ProSiteProfiles TCP domain profile. 99 157 IPR017887 -
Pvu8g0209 358 ProSiteProfiles R domain profile. 210 227 IPR017888 -
Pvu8g0209 358 MobiDBLite consensus disorder prediction 1 21 - -
Pvu8g0209 358 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 7 357 IPR005333 GO:0003700
Pvu8g0209 358 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 7 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0209 Pvu-Chr8 1767656 1769721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0209 53 224 TCP Transcription Factor Family AT1G67260 41.053 8.86e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pvu8g0209 TCP 5.7e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0209 8 1767656 1769721 Pvu3g1833 3 38915081 38919278 ECH
Pvu8g0209 8 1767656 1769721 Pvu8g0209 8 1767656 1769721 ECH
Pvu9g2070 9 29708357 29710342 Pvu8g0209 8 1767656 1769721 ECH