Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0128 ATGGTCTTCCCGTCCCTTCCAATCTACCTAGATCCACCCAACTGGTCACAACAGCAACCTAATCGGCCAGCAGGAATTGGCATCCAGACTCCACCACCTTTGCAGTCGCCACCTTCATCGATGACGGCTGTTATCGGTGGTGGCGGCGGCTACCAAGGTTCAATCAGACCTGGATCAATGGCTGATAGGGCAAGGATGGCAAAGATACACCAACCTGATGCAGCACTCAAATGTCCACGATGTGAATCTGCCAACACCAAGTTTTGCTACTACAACAACTACAGCCTTTCTCAGCCTCGCCACTTCTGCAAGACTTGCCGGCGTTACTGGACCAGAGGCGGTGCACTCAGGAACGTGCCGGTTGGAGGTGGTTGCAGAAGGAACAAAAGAAGCAAGGGAAGTAACGGTAGATCGAAGTCTCCTATGAAACCCTCAACAGGCTCTAATTCTTCTTCTAGTGGCTGCACCACTGATCATGTGATGATGGCAACACAAACTCAGTTTCCATTCTTGACCTCTTTACATCATTACAATAGTGACTACGTTTCTGGGGGCATTGGATCTCATTTTGGGGCGATCACAACACCTTTGGTGGCTAGAAATGACAGTGATCTTGAGTTTCAAATCGGCACTAGTTCAGCTTCATCACTAGGTAACAGTGGTGGAGATATGTTGTCAAATGGCCTTGCGGAGCAATGGAGGTTGAACAATCTGCAACAAGTTCAGCAGCAGTTTCCATTTCTGAGCACTAATTTGGAGCCACAGATTGGGTTGTTTCAGTTTGGTGGTGGAGAAAATAACAATGCTGAACCACCAAGTTATGCAAAAGATGGAGGGAGGTTTAACATTCGTTCTAAACTAGATTCTATTTCTAGTCTAAGTGGGATAATGCCTCAGATTAACACGATAAAGATGGAAGAAAGCCAAGGTTTGAGTTTGCCAAAAAATCTCTTGATGGGTAGTTCAGGAAATGATGTACTTTGGAACAATGGAAGTGGCAATGCATGGAGTGAGCTTCCTTGCTTCACTCCTTCACATAACCACTTCTTGTGA 1053 0.4634 MVFPSLPIYLDPPNWSQQQPNRPAGIGIQTPPPLQSPPSSMTAVIGGGGGYQGSIRPGSMADRARMAKIHQPDAALKCPRCESANTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGSNGRSKSPMKPSTGSNSSSSGCTTDHVMMATQTQFPFLTSLHHYNSDYVSGGIGSHFGAITTPLVARNDSDLEFQIGTSSASSLGNSGGDMLSNGLAEQWRLNNLQQVQQQFPFLSTNLEPQIGLFQFGGGENNNAEPPSYAKDGGRFNIRSKLDSISSLSGIMPQINTIKMEESQGLSLPKNLLMGSSGNDVLWNNGSGNAWSELPCFTPSHNHFL* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0128 350 ProSiteProfiles Zinc finger Dof-type profile. 76 130 IPR003851 GO:0003677|GO:0006355
Pvu8g0128 350 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 15 346 - -
Pvu8g0128 350 MobiDBLite consensus disorder prediction 137 156 - -
Pvu8g0128 350 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 346 IPR045174 GO:0003700|GO:0006355
Pvu8g0128 350 Pfam Dof domain, zinc finger 74 130 IPR003851 GO:0003677|GO:0006355
Pvu8g0128 350 ProSitePatterns Zinc finger Dof-type signature. 78 114 IPR003851 GO:0003677|GO:0006355
Pvu8g0128 350 MobiDBLite consensus disorder prediction 120 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0128 Pvu-Chr8 1111164 1112976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0128 1 132 C2C2-Dof Transcription Factor Family AT2G37590 58.621 1.52e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pvu8g0128 zf-Dof 8.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0128 - - vun:114185583 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0128 8 1111164 1112976 Pvu8g0128 8 1111164 1112976 ECH