Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2756 ATGGAGAGTGGATGGAAGGCTGAGGTTGAGATATCACCAAATTGTCCTAGGTGTGGTTCTTCCAACACCAAGTTCTGCTACTACAATAACTACAGCTTAACTCAACCAAGGTACTTTTGCAAAGGGTGCAGAAGGTACTGGACCAAAGGAGGCTCTCTCCGCAATGTCCCTGTTGGTGGTGGCTGCAGGAAAAACAGAAGGGGTAACAAAACCTTGTTGAGACAATCCATTGATGGTTTCACTTTCAAAAGTTCATCATCACCTTGTGGCAATGCCACAGATCATGATAATAAGCCTGTTGGGCATTCTTATGATCCTAGAATAAGGACTTCTGCAGCTTCTAGCTCCTCCCCAGTGGTGAGTGATGCACCAAATATTGATCTTGCACTAGTGTATGCAAGTTTCCTCAACCAAAAGCCCTGTTCTGAATCTGGGATTGAGAGCAATAATCCAGATCAAGTTCAAACAGCTTTTGATCCTTCTCTAGAGAATAATTCAAGGCTATTGAACACAGATGTTTCTGGTCCAAGTACTTTGCCTGAAGAAATTGGTGTTACTGGGTGCTTGGATCTTCCTGAACAACCATCCACACATTCTAATAATAGCCAAATGTGCTATGGTGAGTTGAACACTATGCAGAGTATTCAAAAAGATGGAATTGAGCAGTGTAGTAGTGATGGTGGTGGTATGAACTTTGAGCTGCCACCATTACCGGGTGAAGTGGAAGCCTCACATGAGCATCATATGATGTGGTCAAATTCTGAGATGATGATAAATCATGATGCAGACTTGTTAATAGGTAATTGGAGCCCCTTTGATTTGCCTTGA 828 0.4275 MESGWKAEVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGNKTLLRQSIDGFTFKSSSSPCGNATDHDNKPVGHSYDPRIRTSAASSSSPVVSDAPNIDLALVYASFLNQKPCSESGIESNNPDQVQTAFDPSLENNSRLLNTDVSGPSTLPEEIGVTGCLDLPEQPSTHSNNSQMCYGELNTMQSIQKDGIEQCSSDGGGMNFELPPLPGEVEASHEHHMMWSNSEMMINHDADLLIGNWSPFDLP* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2756 275 Pfam Dof domain, zinc finger 14 67 IPR003851 GO:0003677|GO:0006355
Pvu7g2756 275 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 1 261 - -
Pvu7g2756 275 ProSitePatterns Zinc finger Dof-type signature. 15 51 IPR003851 GO:0003677|GO:0006355
Pvu7g2756 275 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 261 IPR045174 GO:0003700|GO:0006355
Pvu7g2756 275 ProSiteProfiles Zinc finger Dof-type profile. 13 67 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2756 Pvu-Chr7 50584990 50585817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2756 7 274 C2C2-Dof Transcription Factor Family AT3G52440 39.590 1.64e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pvu7g2756 zf-Dof 4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2756 - - gmx:100794208 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2756 7 50584990 50585817 Pvu7g2756 7 50584990 50585817 ECH
Pvu1g2033 1 46235911 46236696 Pvu7g2756 7 50584990 50585817 PCT