Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2382 ATGTCGCTGCAAACTTGTTCGGCGGACCAACTAGCCCAGCTCTTTGGCTCAAACACAACCGACCCCCACGCCGCCGCCACGCTGATATGCGACCAGTTCGCCGCCGTCAGTAGGAACTTCACTGACACGGGCTACGCCATCGACAGCACCTACCTCCTCTTCTCCGCGTACCTCGTGTTCTCGATGCAGCTCGGCTTCGCCATGCTCTGCGCGGGTTCAGTCCGCGCCAAAAACACCATGAACATCATGCTCACCAACGTACTCGACGCCGCCGCCGGCGGCCTCTTCTACTACCTCTTTGGTTTCGCCTTCGCCTTCGGCTCCCCTTCAAACGGCTTCATCGGGAAACACTACTTCGGCCTCACAGACATCCACGCCCAGAATTTAGACTACAGCAACTTCCTTTACCAGTGGGCCTTCGCCATCGCCGCCGCCGGCATCACCAGCGGCTCCATCGCCGAGCGAACGCAGTTCGTCGCGTACCTAGTCTACTCTTCCTTCCTCACCGGGTTTGTGTATCCGGTAGTCTCTCACTGGTTCTGGTCCCCTGACGGTTGGGCATCCGCGTTCAACCTACACAATCTTTTATTCTCCACCGGCGTAATCGACTTCGCCGGCTCCGGCGTTGTCCATATGGTCGGCGGCGTGGCGGGACTCTGGGGCGCGCTTATCGAGGGTCCCCGAATCGGGCGATTCGATCACACGGGACGCGCGGTGGCCTTACGTGGCCACAGCGCCTCGTTAGTCGTGCTCGGAACCTTCATGCTGTGGTTCGGTTGGTACGGTTTTAACCCTGGTTCGTTCAACAAAATCTTGGTCCCTTATAACCCAGGGTCTAAGTACGGTCAATGGAGCGCGGTTGGGAGAACCGCGGTTACCACAACTCTGGCAGGCTCAACGGCGGCGTTGACCACGCTCTTCGGGAAACGGGTGCTGTCTGGTCACTGGAACGTCACCGATGTCTGCAACGGTTTGTTGGGCGGATTCGCCGCCATCACAGCCGGTTGTGCTGTGGTAGAGCCGTGGGCAGCTATCGTGTGTGGTTTTGTGGCGTCCGTTGTCTTGATCGCGTGTAACAAACTGGCGGAGAGGGTTAGGTTTGACGATCCGTTAGAGGCGGCGCAGCTGCATGGAGGGTGCGGCGCGTGGGGGGTGATTTTCACGGCGCTGTTCGCGAAGAAGGAGTACGTATTTGAGGCTTACGGGGGAGATGCGTCGAGGCCGCACGGGTTGTTCATGGGGGGTGGAGGGCGGTTGTTGGCGGCGCACGTGATTCAGATTTTGGTCATTGTTGGGTGGGTTAGTGCCACCATGGGACCTCTCTTCTGGCTGCTAAAAAAATTGAATCTTTTGAGGATTTCCTCCGAAGATGAACTCGCGGGTATGGATATGACCCGGCATGGAGGGTTTGCGTACGCCTATGAGGATGATGAGACGCAGAAGCATGGGATTCAGTTGAGAAAGGTTGAACCCAACTCCTCCACTCCCACCACTGATGAGTGA 1503 0.5795 MSLQTCSADQLAQLFGSNTTDPHAAATLICDQFAAVSRNFTDTGYAIDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGSPSNGFIGKHYFGLTDIHAQNLDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLVYSSFLTGFVYPVVSHWFWSPDGWASAFNLHNLLFSTGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHTGRAVALRGHSASLVVLGTFMLWFGWYGFNPGSFNKILVPYNPGSKYGQWSAVGRTAVTTTLAGSTAALTTLFGKRVLSGHWNVTDVCNGLLGGFAAITAGCAVVEPWAAIVCGFVASVVLIACNKLAERVRFDDPLEAAQLHGGCGAWGVIFTALFAKKEYVFEAYGGDASRPHGLFMGGGGRLLAAHVIQILVIVGWVSATMGPLFWLLKKLNLLRISSEDELAGMDMTRHGGFAYAYEDDETQKHGIQLRKVEPNSSTPTTDE* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2382 500 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pvu7g2382 500 TIGRFAM amt: ammonium transporter 48 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pvu7g2382 500 Gene3D Ammonium transporter AmtB like domains 27 491 IPR029020 -
Pvu7g2382 500 PANTHER AMMONIUM TRANSPORTER 4 494 - -
Pvu7g2382 500 Pfam Ammonium Transporter Family 51 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pvu7g2382 500 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 4 494 - -
Pvu7g2382 500 SUPERFAMILY Ammonium transporter 46 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2382 Pvu-Chr7 47133791 47135917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2382 4 497 Inorganic Solute Cotransporters AT4G13510 79.394 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2382 K03320 - gmx:100796502 840.106