Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1088 ATGGCACTCTCGCGCCTTCGCCACCCTCTCTTATCTCGCTCCCTTCGCATCCTCTCTTCTTCTACCAGATCCCTCTCTCGAACTTGTAATTCAACGATTTTTTCCGCGGGAGCTCATGCGAATATAAGACCCACATCTTGCTCAGGGATTACTCGAATTTATGATAGATCTTTGAAGTCAAAGTGGACTGATGTCAAATGCTTTTCATCTTCAGATATTTCACATGAAGTCCTTGGGATGCCTGCTTTATCTCCTACAATGACGCAAGGTAATATTGCAAAGTGGAGGAAGAAAGAAGGAGAAAAGATAGAAGTGGGGGATATACTATGTGAAATTGAAACTGACAAAGCTACACTAGAATTTGAAAGTCTTGAAGAGGGATTTCTGGCTAAGATATTGGTACCTGAAGGTTCAAAAGATGTGCCTGTTGGACAACCAATTGCTATAACAGTTGAGGATGAAAAGGACATCCAAAATGTTCCTGCTTCTGTGGGGGGTGGGATTGAAGAGACTAAACCAGCCCAGCAGGATGTTACAGATGAGGGGAAACCAGAATCAACTTCTACTATGATTAATGCATCAGAACTTCCTCCTCATCTCCTTGTTGAAATGCCAGCTTTGTCTCCAACAATGAACCAAGGTAACATTGTTAAATGGAGGAAACAAGAAGGAGACAAGATTGAAGTGGGTGATATATTATGTGACATAGAGACAGACAAAGCTACACTTGAGTTTGAAACTCTTGAAGAGGGGTACCTGGCTAAGATACTTGCTCTGGAAGGTTCGAAAGAAGTGGCAGTTGGGCACCCTATTGCGATAACAGTTGAAGATGCAAGTGACATTGAAGCTATAAAGAATTCTGTTAGCAGCAGTTCAACAAAACAACAGAAGGCCCCCCAACATGATACTAAAAGTGAGGTCAAAGCTCAAAAAAACAAAATAACACGAATCAGCCCAGCTGCAAAGTTGCTTATTGCAGAATATGGATTGGATGCATCAACATTGAATGCAACTGGTCATTACGGCACCCTACTGAAAGGGGATGTTCTTTCTGAAATTAAGTCAGGAAAATTGTCTCCTAAAGCTGCTTCATCTAAAGAAAAGGTGACGTCATCTCAAAGTCATCAACAGGTTGCAGCTTCTAAGTCTGACCTAGAGCAGTCTGATGCTTATGAAGATTTTCCTAATAGTCAAATTCGCAAGGTGATTGCCAAGAGGTTATTGGAATCAAAACAAAATACGCCACACTTATATTTATCATCAGATGTCATACTGGATCCTCTTCTTTCCCTTCGGAAGGATCTTAAAGAGCAGTATGATGTTAAAGTTTCTGTGAATGACATTATTATCAAAGTTGTAGCCACGGCTCTCAAAAATGTACCTGAAGCAAACGCATACTGGAATGTTGAGAAGGGTGAGATCATTTTAAATGATTCTATTGATATATCCATAGCAGTTGCCACGGATAAGGGCTTGATGACTCCAATAATAAAAAACGCTGATCAGAAGACTATCTCTGCTATCTCCTCAGAGGTCAAGGAACTAGCTGCAAAGGCACGTGATGGCAAGTTGAAGCCACAGGAATTCCAAGGGGGGACTTTTAGCATTTCAAACTTAGGAATGTTTCCTGTGGATAAATTTTGTGCTATTATAAACCCCCCTCAGGCCTGCATTCTTGCTGTTGGTAGAGGCAACAAAGTTGTGGAACCAGTAATTGGAGATGATGGAGTTGAGAAGCCATCGATTGCCACTAAGTTGAGCTTAACGTTGTCTGCTGATCATCGTGTTTTTGAAGGCAAGGTTGGAGGTGCATTTCTCTCTGCGTTGCAATCAAACTTCAGTGATATAAGACGACTTCTTTTATAA 1866 0.4126 MALSRLRHPLLSRSLRILSSSTRSLSRTCNSTIFSAGAHANIRPTSCSGITRIYDRSLKSKWTDVKCFSSSDISHEVLGMPALSPTMTQGNIAKWRKKEGEKIEVGDILCEIETDKATLEFESLEEGFLAKILVPEGSKDVPVGQPIAITVEDEKDIQNVPASVGGGIEETKPAQQDVTDEGKPESTSTMINASELPPHLLVEMPALSPTMNQGNIVKWRKQEGDKIEVGDILCDIETDKATLEFETLEEGYLAKILALEGSKEVAVGHPIAITVEDASDIEAIKNSVSSSSTKQQKAPQHDTKSEVKAQKNKITRISPAAKLLIAEYGLDASTLNATGHYGTLLKGDVLSEIKSGKLSPKAASSKEKVTSSQSHQQVAASKSDLEQSDAYEDFPNSQIRKVIAKRLLESKQNTPHLYLSSDVILDPLLSLRKDLKEQYDVKVSVNDIIIKVVATALKNVPEANAYWNVEKGEIILNDSIDISIAVATDKGLMTPIIKNADQKTISAISSEVKELAAKARDGKLKPQEFQGGTFSISNLGMFPVDKFCAIINPPQACILAVGRGNKVVEPVIGDDGVEKPSIATKLSLTLSADHRVFEGKVGGAFLSALQSNFSDIRRLLL* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1088 621 Pfam e3 binding domain 316 350 IPR004167 GO:0016746
Pvu7g1088 621 CDD lipoyl_domain 202 273 - -
Pvu7g1088 621 MobiDBLite consensus disorder prediction 361 387 - -
Pvu7g1088 621 MobiDBLite consensus disorder prediction 364 387 - -
Pvu7g1088 621 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 309 354 IPR036625 GO:0016746
Pvu7g1088 621 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 224 253 IPR003016 -
Pvu7g1088 621 ProSiteProfiles Biotinyl/lipoyl domain profile. 199 275 IPR000089 -
Pvu7g1088 621 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 316 353 IPR004167 GO:0016746
Pvu7g1088 621 SUPERFAMILY Single hybrid motif 77 166 IPR011053 -
Pvu7g1088 621 Gene3D - 316 357 IPR036625 GO:0016746
Pvu7g1088 621 SUPERFAMILY CoA-dependent acyltransferases 383 621 - -
Pvu7g1088 621 CDD lipoyl_domain 80 149 - -
Pvu7g1088 621 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 391 620 IPR001078 GO:0016746
Pvu7g1088 621 Gene3D - 69 173 - -
Pvu7g1088 621 Gene3D - 197 300 - -
Pvu7g1088 621 MobiDBLite consensus disorder prediction 286 311 - -
Pvu7g1088 621 MobiDBLite consensus disorder prediction 161 191 - -
Pvu7g1088 621 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 100 129 IPR003016 -
Pvu7g1088 621 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 194 616 IPR045257 GO:0006086|GO:0045254
Pvu7g1088 621 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 74 184 IPR045257 GO:0006086|GO:0045254
Pvu7g1088 621 SUPERFAMILY Single hybrid motif 200 292 IPR011053 -
Pvu7g1088 621 Gene3D - 375 621 IPR023213 -
Pvu7g1088 621 ProSiteProfiles Biotinyl/lipoyl domain profile. 75 151 IPR000089 -
Pvu7g1088 621 Pfam Biotin-requiring enzyme 202 273 IPR000089 -
Pvu7g1088 621 Pfam Biotin-requiring enzyme 78 149 IPR000089 -
Pvu7g1088 621 PANTHER PYRUVATE DEHYDROGENASE PROTEIN X COMPONENT, MITOCHONDRIAL 74 184 - -
Pvu7g1088 621 PANTHER PYRUVATE DEHYDROGENASE PROTEIN X COMPONENT, MITOCHONDRIAL 194 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1088 Pvu-Chr7 12332622 12345836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1088 192 621 Acyl Lipid Metabolism Gene Families AT3G13930 41.099 1.76e-104 325
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1088 7 12332622 12345836 Pvu7g1088 7 12332622 12345836 ECH