Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1054 ATGTATTTCTTCACTGAGAAAATACAGCGTTTGAAGATGGGATTTCCTGACTACATCCAGGCATTGGAAGAAGAACGCCGTAAGATTCAGGTGTTCTGCAAAGAGCTTCCTCTTTCTTTGGAACTAGTTACTCAAGCCATTGAAGCTTGCAAACAACAATTGTCTGGTACCACGAGCGAGTATAATTTGAATGGTCAATCGGAGTGTTCGGAGCGGACAACATCAACGGAGGGACCAGTTTTGGAGGAGTTCATTCCAATCAAGAAAAGGGCATCATCATCCCCTTGTTGCGATGAAGATGATGAAGACAATGAACAGCATTCTCTCAAGCAAAGCGTTTTGAATGAGAATAATGACAGTGATAAGAGGAAATCCGACTGGCTTAGATCTGTTCAGTTGTGGAATCCAGATCCCCCGGCTGAGGAGGATGCGACTAGGAAAGTGCCTGGGATGGAATTGAAGAGAAGTGGAAGTATTGGTGGTGCTTTCCACCCATTCCACAAGGAAGAAAGAGCTGCAAAGGCAGCTGAATCATTGTGTAAAGCACCCTCTTCAACCCGGGTAGCTGCTGCGAGTTCTAGCGCCGGAGAACTCACCCCAGAAAAAAATCTGAACGAGGGACAGAGAAAGCAGCGCAGGTGCTGGTCTCAGGACTTGCATAAGCGCTTCTTGCATGCCCTTCAGCAACTTGGGGGTGCAGATTCTGCCACACCAAAACAAATCAGAGAGCTAATGAATGTTGATGGCCTCACAAATGATGAAGTCAAAAGCCATTTACAGAAATACCGTTTGCACACTAGAAGGCCAAGTCCCTTGGTTCACAACAGTTCCAGTCCACAAGCAGCGCCTTTTGTCCTTGTAGGGAACATTTTTGTTCAGTCACCAGAATATGCAGCTGTAGCCACCTCAACAGCATCGAGAGAAGTGATCACAGTTGCAGCACCTGGTGGAGTTTATGCACCAGTGGCCACACATCCTACACCTGTTTCACAACCATCAGCTGATTCAATTAAGAAGCCACAGTTTAAGAAATCTAAGCATTCTGAACATTCAAATTCAGATGAAAGGGCTCATCACAGTGAAGGAGCTGTCCATTCAAATTCCCCTACCTCATCCTCCTCTACACACACCTCTACTTCCCCTGGTTATTAA 1152 0.4601 MYFFTEKIQRLKMGFPDYIQALEEERRKIQVFCKELPLSLELVTQAIEACKQQLSGTTSEYNLNGQSECSERTTSTEGPVLEEFIPIKKRASSSPCCDEDDEDNEQHSLKQSVLNENNDSDKRKSDWLRSVQLWNPDPPAEEDATRKVPGMELKRSGSIGGAFHPFHKEERAAKAAESLCKAPSSTRVAAASSSAGELTPEKNLNEGQRKQRRCWSQDLHKRFLHALQQLGGADSATPKQIRELMNVDGLTNDEVKSHLQKYRLHTRRPSPLVHNSSSPQAAPFVLVGNIFVQSPEYAAVATSTASREVITVAAPGGVYAPVATHPTPVSQPSADSIKKPQFKKSKHSEHSNSDERAHHSEGAVHSNSPTSSSSTHTSTSPGY* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1054 383 MobiDBLite consensus disorder prediction 319 383 - -
Pvu7g1054 383 MobiDBLite consensus disorder prediction 91 163 - -
Pvu7g1054 383 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 381 IPR044787 GO:0003700|GO:0006355
Pvu7g1054 383 Pfam Myb-like DNA-binding domain 212 263 IPR001005 -
Pvu7g1054 383 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 381 - -
Pvu7g1054 383 SUPERFAMILY Homeodomain-like 208 268 IPR009057 -
Pvu7g1054 383 Gene3D - 209 267 - -
Pvu7g1054 383 MobiDBLite consensus disorder prediction 363 383 - -
Pvu7g1054 383 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 210 265 IPR006447 GO:0003677
Pvu7g1054 383 MobiDBLite consensus disorder prediction 339 362 - -
Pvu7g1054 383 MobiDBLite consensus disorder prediction 93 109 - -
Pvu7g1054 383 MobiDBLite consensus disorder prediction 191 211 - -
Pvu7g1054 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 207 267 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1054 Pvu-Chr7 11668153 11670893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1054 4 260 G2-like Transcription Factor Family AT1G25550 53.585 4.59e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu7g1054 Myb_DNA-binding 3e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1054 7 11668153 11670893 Pvu7g1054 7 11668153 11670893 ECH