Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0801 ATGGGCAAGAGCAAAAACTCTCGTGCTTTTCCTCTTCTCCTTCCCCTCCTCTTCTTCACTCTTGTAGGAGCCTCTCATGGCGGTGGCATAGCCATCTACTGGGGCCAAAACGGCAACGAGGGTACCCTTTCGGAAGCATGTGCCACAGGGAGATACACTCACGTAAACATAGCTTTCCTCAACGTATTCGGCAATGGCCAAACCCCAGAAATGAACCTGGCTGGTCACTGCAACCCCGCAACCAATTCCTGCACAAAGTTCAGCGCTGAAATCAAGGACTGCCAGAGCAAAAACATCAAGGTGTTGCTTTCCATTGGTGGTGGCATTGGAAGCTACACTTTGGCTTCCGTTGAGGATGCAAGAAACGTTTCAACCTTCTTGTGGAACACTTTCTTGGGGGGCAACTCATCAACAAGACCACTAGGCGATGCCGTGTTAGATGGCATAGATTTCGACATAGAACAAGGCTCAACAGAAAACTATGAGCACCTTGCACGTTTCCTCAAAGAATATAGTAGGGTAGGGAAGAGGGTATACCTAGGTGCTGCCCCTCAGTGTCCAATTCCTGATAGGTTTTTGGGCACTGCCCTAGACACAGGCCTATTTGACTTTGTTTGGGTTCAGTTCTACAACAACCCTCCATGCTCCTACGCAGATGGGAACATAACTAACCTTGTGAATTCTTGGAACCGTTGGACCAGTACAGTGCCAGCAGGGAAGATATTCTTAGGGTTGCCGGCGGCTCCGGCAGCCGCTGGCAGCGGTTTCATCCCGGCCGATGTGTTAACGTCTCAAATCCTTCCGGTGATTAAGGAGTCGCCAAAATATGGTGGGGTGATGCTGTGGTCAAGATTCTTTGATGTTGAGAACGGGTATAGTGCTTCAATTATTGGAAGCGTGTGA 903 0.495 MGKSKNSRAFPLLLPLLFFTLVGASHGGGIAIYWGQNGNEGTLSEACATGRYTHVNIAFLNVFGNGQTPEMNLAGHCNPATNSCTKFSAEIKDCQSKNIKVLLSIGGGIGSYTLASVEDARNVSTFLWNTFLGGNSSTRPLGDAVLDGIDFDIEQGSTENYEHLARFLKEYSRVGKRVYLGAAPQCPIPDRFLGTALDTGLFDFVWVQFYNNPPCSYADGNITNLVNSWNRWTSTVPAGKIFLGLPAAPAAAGSGFIPADVLTSQILPVIKESPKYGGVMLWSRFFDVENGYSASIIGSV* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0801 300 PANTHER ENDOCHITINASE 10 300 - -
Pvu7g0801 300 Pfam Glycosyl hydrolases family 18 30 284 IPR001223 GO:0005975
Pvu7g0801 300 PANTHER ACIDIC ENDOCHITINASE 10 300 - -
Pvu7g0801 300 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 146 154 IPR001579 GO:0004553|GO:0005975
Pvu7g0801 300 Gene3D Glycosidases 28 299 - -
Pvu7g0801 300 CDD GH18_hevamine_XipI_class_III 28 298 IPR045321 -
Pvu7g0801 300 SUPERFAMILY (Trans)glycosidases 25 296 IPR017853 -
Pvu7g0801 300 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 300 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0801 Pvu-Chr7 7269770 7270959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0801 28 300 Glycoside Hydrolase AT5G24090 67.399 3.96e-146 411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1731 11 43676866 43678126 Pvu7g0801 7 7269770 7270959 ECH
Pvu7g0801 7 7269770 7270959 Pvu7g0801 7 7269770 7270959 ECH
Pvu4g1079 4 29924393 29926225 Pvu7g0801 7 7269770 7270959 PCT