Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0383 ATGTTAATGCTGGTTTCCATGGCGCTTTTTCGATCATCCAAAAGGTTCATCATCTCCAATCTTCTCCTTCCCCTCACAGAAACTTCTTCAACATTGCTTCCTCCTTTGTCAAGTTCAAATTTTTACCACCATTACTCCACACCCACAATCCAAGTTCCCTATGGGTCTCCAAAAAACACCACATTGGCCTTCCACACGGCCCAACCTAGCTCCACCCCCAACGCCGAAGCAATCTGCAGAATCTTATCCAACTCCCGCGACTCCACCGTCGACGTCTCTCTCGCTGCTGTTGTGGTGAATCCCTCGCCGGAGCTGGTACTGGAGGTCTTGAACAAACTCAGCAATGCCGGTACCCTCGCGCTTTCGTTCTTCCGTTGGGCCGAGAGGCAAAGCGAGTTCAAACACACCACAGAGACCTTCCACGCATTGATCGAAGCACTGGGAAAGATCAGACAGTTCAAAATGATTTGGACTTTGATCGACGACATGAAGCAACGAAAGTTGCTGACTTCTGACACTTTTGCCCTCGTTGCTCGGCGATACGCGCGAGCACGGAAGGTCAAGGAGGCAACTGAGATATTCGAGAAGATGGAGCGTTACGGTTTGAAGCCGCATGTAACGGATTTCAATAGGTTGATCGATGTGTTGTGTAAATCCAAGTGTGTTGAGAAGGCACATGAGGTGTTTGATAAAATGCGGCGCTTAGGCTTGGACCCTGATATCAAGTCCTACACCATTTTGCTAGAAGGGTGGAGTCAGCTGCAGAACCTGACCAAACTCAATGAGTTGTGTAGGGAGATGGAGGATAAAGGGTTTCAGATTGATGTTGTTGCGTATGGCATAATCATCAATGCGTATTGCAAGGCTAAGAAATTTGATGAAACCATTGGGTTGTACCATGAAATGAAAGCTAAGGGTGTGAGGCCTAGTCCCCATGTGTATTGTACTTTGATCAATGGTTTGGGTTCGGATAAGAGATTGAACCAAGCTCTTGAATTTTTTGAGGTATCTAAGGCTAGTGGCTTTGCACCAGAGGCTCCCACCTACAATGCTGTTGTTGGGGCTTATTGCTGGTCTATGCGTATGGATGATGCGTATAGGATGGTTGGTGAGATGAAAAAATGTGGGATTGGTCCAAATTCTCGAACTTTTGATATTATACTTCATCATCTTATAAAGGTTGGTAGGATTGAAGAAGCTTGCACGGTTTTTCGCAGAATGAATGGCGAGTTTGGGTGTGAGCCGAGTGTGAGCACGTATGAGATCATGGTGAGGATGTTTTGTAATGAAGTGAGATTGGATATGGCGATGGCAGTTTGGGATGAGATGAAAGAGAAAGGAATTCTTCCTGGAGTGCACATGTTCTCCACGTTGATCTGTTCCTTGTGCCATGAAAATAAGTTGAATGAAGCGTGTAAGTACTTTCAAGAAATGTTGGATGTGGGTATTCGGCCTCCTGCCAAAATGTTCAGCACCTTGAAGGAAGCTCTAGTTGATGCGAGGATGGAGCATGTTGCCATGCATTTTGCTATGAAAATTGATAAACTCAGGAAATCTCCTTTGGTTGCTTGA 1572 0.458 MLMLVSMALFRSSKRFIISNLLLPLTETSSTLLPPLSSSNFYHHYSTPTIQVPYGSPKNTTLAFHTAQPSSTPNAEAICRILSNSRDSTVDVSLAAVVVNPSPELVLEVLNKLSNAGTLALSFFRWAERQSEFKHTTETFHALIEALGKIRQFKMIWTLIDDMKQRKLLTSDTFALVARRYARARKVKEATEIFEKMERYGLKPHVTDFNRLIDVLCKSKCVEKAHEVFDKMRRLGLDPDIKSYTILLEGWSQLQNLTKLNELCREMEDKGFQIDVVAYGIIINAYCKAKKFDETIGLYHEMKAKGVRPSPHVYCTLINGLGSDKRLNQALEFFEVSKASGFAPEAPTYNAVVGAYCWSMRMDDAYRMVGEMKKCGIGPNSRTFDIILHHLIKVGRIEEACTVFRRMNGEFGCEPSVSTYEIMVRMFCNEVRLDMAMAVWDEMKEKGILPGVHMFSTLICSLCHENKLNEACKYFQEMLDVGIRPPAKMFSTLKEALVDARMEHVAMHFAMKIDKLRKSPLVA* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0383 523 Gene3D Tetratricopeptide repeat domain 409 484 IPR011990 GO:0005515
Pvu7g0383 523 Gene3D Tetratricopeptide repeat domain 269 336 IPR011990 GO:0005515
Pvu7g0383 523 Gene3D Tetratricopeptide repeat domain 337 408 IPR011990 GO:0005515
Pvu7g0383 523 Pfam PPR repeat family 275 321 IPR002885 -
Pvu7g0383 523 Pfam PPR repeat family 348 392 IPR002885 -
Pvu7g0383 523 Pfam PPR repeat family 209 250 IPR002885 -
Pvu7g0383 523 TIGRFAM PPR: pentatricopeptide repeat domain 277 310 IPR002885 -
Pvu7g0383 523 TIGRFAM PPR: pentatricopeptide repeat domain 383 417 IPR002885 -
Pvu7g0383 523 TIGRFAM PPR: pentatricopeptide repeat domain 348 380 IPR002885 -
Pvu7g0383 523 TIGRFAM PPR: pentatricopeptide repeat domain 173 204 IPR002885 -
Pvu7g0383 523 TIGRFAM PPR: pentatricopeptide repeat domain 209 241 IPR002885 -
Pvu7g0383 523 TIGRFAM PPR: pentatricopeptide repeat domain 313 344 IPR002885 -
Pvu7g0383 523 TIGRFAM PPR: pentatricopeptide repeat domain 419 451 IPR002885 -
Pvu7g0383 523 TIGRFAM PPR: pentatricopeptide repeat domain 454 485 IPR002885 -
Pvu7g0383 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 205 239 IPR002885 -
Pvu7g0383 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 380 415 IPR002885 -
Pvu7g0383 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 310 344 IPR002885 -
Pvu7g0383 523 Pfam PPR repeat 179 202 IPR002885 -
Pvu7g0383 523 Pfam PPR repeat 139 167 IPR002885 -
Pvu7g0383 523 Gene3D Tetratricopeptide repeat domain 104 268 IPR011990 GO:0005515
Pvu7g0383 523 PANTHER OS01G0505500 PROTEIN 72 520 - -
Pvu7g0383 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 416 450 IPR002885 -
Pvu7g0383 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 451 485 IPR002885 -
Pvu7g0383 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 275 309 IPR002885 -
Pvu7g0383 523 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 72 520 - -
Pvu7g0383 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 345 379 IPR002885 -
Pvu7g0383 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 240 274 IPR002885 -
Pvu7g0383 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 170 204 IPR002885 -
Pvu7g0383 523 Pfam PPR repeat 446 478 IPR002885 -
Pvu7g0383 523 Pfam PPR repeat 412 444 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0383 Pvu-Chr7 2996282 2998408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0383 139 501 Glycosyltransferase AT1G05670 27.198 7.32e-48 175
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0383 7 2996282 2998408 Pvu7g0383 7 2996282 2998408 ECH