Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0372 ATGGCCATTCCATACCCCCATTTCATTGCCACCGAGAAGGCTGCCATGGACGCCGGCCTTCTCCACCCTTCCTCCTCCCCCTCCGTCATCTTCACCCAAGATGACCTTAAGAAGATCGCCGCCTACAAGGCCGTCGAGTACGTTGAATCCGGCATGGTTCTCGGCCTTGGCACTGGCTCCACCGCCAAGCACGCTGTCGAACGCATCGGCGAGCTTCTCCGCCAGGGCAAACTCAAAGACATCGTCGGGATACCCACCTCCAAGATGACTCACGAACAGGCACTCTCCCTCGGGATCCCCCTGTCCGATCTCGACTCCCACCCCGTCGTCGATCTGGCCATCGACGGCGCCGACGAGGTTGACCCTTTTCTCAACCTCGTCAAGGGTCGCGGCGGCTCCCTCCTGAGGGAGAAGATGGTGGAGAGCGCGTGCAAGAAGTTTATTGTCATTGTTGATGAGTCCAAGCTTGTCAACTATGTGGGGGGAAGTGGATTGGCCATGCCCGTTGAGGTTATTCCGTTTTGTTGGAGGTTCTCTGCCGAGAGGTTGCGCAAGCTGTTTCAGGAGGCTGGGTGTGTTGCCAAGCTTAGGACTTTTGGGGAGAAGGAGGAGCCCTTTGTCACGGACAATGGGAACTTCATTGTGGATTTGTATTTCGAGAGGAGTATTGGGGATTTGAAGGCTGCCAGTGACGCAATTCTGCAGCTTGCTGGGGTGGTGGAGCATGGCATGTTTCTGGACATGGCTACCACTGTTATTGTGGCAGGGGAGCTGGGCTTGACGGTGAAGAATAAGTAG 798 0.5627 MAIPYPHFIATEKAAMDAGLLHPSSSPSVIFTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVERIGELLRQGKLKDIVGIPTSKMTHEQALSLGIPLSDLDSHPVVDLAIDGADEVDPFLNLVKGRGGSLLREKMVESACKKFIVIVDESKLVNYVGGSGLAMPVEVIPFCWRFSAERLRKLFQEAGCVAKLRTFGEKEEPFVTDNGNFIVDLYFERSIGDLKAASDAILQLAGVVEHGMFLDMATTVIVAGELGLTVKNK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0372 265 SUPERFAMILY NagB/RpiA/CoA transferase-like 32 216 IPR037171 -
Pvu7g0372 265 TIGRFAM rpiA: ribose 5-phosphate isomerase A 36 259 IPR004788 GO:0004751|GO:0009052
Pvu7g0372 265 CDD RPI_A 36 256 IPR004788 GO:0004751|GO:0009052
Pvu7g0372 265 Gene3D - 36 257 - -
Pvu7g0372 265 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 82 257 IPR004788 GO:0004751|GO:0009052
Pvu7g0372 265 Hamap Ribose-5-phosphate isomerase A [rpiA]. 33 263 IPR020672 GO:0004751|GO:0009052
Pvu7g0372 265 Gene3D - 159 243 - -
Pvu7g0372 265 PANTHER ISOMERASE, PUTATIVE-RELATED 1 265 - -
Pvu7g0372 265 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 165 246 - -
Pvu7g0372 265 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 1 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0372 Pvu-Chr7 2923559 2925067 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0372 7 2923559 2925067 Pvu7g0372 7 2923559 2925067 ECH
Pvu7g0372 7 2923559 2925067 Pvu2g0557 2 4932069 4933829 PCT