Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0353 ATGGAAAAGGGTCTCTTAGAGAAGAAGGGAGAGGTGAAAGACGGTGGTTCAGGCATAATAAGATGGAGTGTGTTTGGTGAAGAGGTGAAAAGGGTTGGTTATTTAGCAGGTCCCATGATTGGTGTGAATCTGTCACAGTATTTTCTACAAATAATATCAATGATGATGGTTGGTCGCTTGGGGAAGCTTGCTCTCTCCAGCACAGCCATTGCCATCTCTCTCTGTAATGTTTCTGGCCTCAGTGTTATTTTTGGAATGTCATGTGCACTTGAAACTCAATGTGGGCAAGCATATGGAGCACAGCAATACAGAAAATTTGGTGTTCAAATTTACACTGCAATTGTCTCCCTTACTTTAGCTTGTCTTCCTCTGACTCTTTTGTGGGTGTACTTGGGGAAGCTGCTCATTATACTTGGCCAAGACCCTTTGATTTCGCAAGAAGCTGGAAAATTTGCTTTGTGCATGGTCCCTGCTCTCTTTGCTTATGCAACACTTCAGTCTTTGGTTCGATTCTTTTTTATGCAAAGTCTGATCAGTCCCCTTGTCATAAGTTCCTCCATTACTCTTTGCTTCCATGTGGCTTTCAGTTGGTTAATGGTTTTTAAATCTGGACTCGGTAACATAGGAGCAGCATTTTCTATCAGTACTTCATACTGGCTGAATGTGATTTTACTTGGATTATATATGAAATTCTCTACTCAGTGTGAAAAGACTCGAGTCCCAATTTCAATGGAACTATTCCATGGGATTGGAGAATTCATCCGCTATGCCATTCCTTCAGCTGGAATGATTTGCCTTGAATGGTGGTCATTTGAGCTAATAATCTTGCTTTCTGGTCTTTTACCAAATCCAGAGCTAGAAACTTCAGTCTTATCCATATGTTTAAACATCACCACAACAATCTACACGATCGCAGAATCAATTGGCTCAGCTGCAAGCACTAGAATTTCGAATGCATTGGGAGCTGGAAATCCACAATCAGCACGAGTATGTGTTTATGCGGCCATGATTCTTGCAGCTTCCGATGCCATTCTGGTGAGCTCAATCATTTTTGCTTGCAGGCAGATTTTAGGTTATGTATTTAGCAATGAGCAGGATGTGGCAGATTATGTTACAGATATGGTTCCTCTCTTAAGTCTCTCTGTTATACTGGACTCCTTATATGGTACCCTTTCAGGTATTGCTAGAGGATGTGGGTGGCAACACTTAGGAGCATATGTAAACCTTGGAGCCTATTATGGTTTTGGAATTCCAACTGCTGCTATATTGGGTTTCTGGATTCTGTTAGGAGGAAAAGGGTTGTGGATTGGAATACTGACTGGTTCCTTCTGTCAAACAGTGATGTTATCTCTCATAACAACAAGTACAAACTGGGAAGAACAGGCAATTAAAGCAAGGGAAAGGATATTTCAGAGAAGTTTTTCTGTAGAAGGTGGATTAATTTAA 1446 0.4101 MEKGLLEKKGEVKDGGSGIIRWSVFGEEVKRVGYLAGPMIGVNLSQYFLQIISMMMVGRLGKLALSSTAIAISLCNVSGLSVIFGMSCALETQCGQAYGAQQYRKFGVQIYTAIVSLTLACLPLTLLWVYLGKLLIILGQDPLISQEAGKFALCMVPALFAYATLQSLVRFFFMQSLISPLVISSSITLCFHVAFSWLMVFKSGLGNIGAAFSISTSYWLNVILLGLYMKFSTQCEKTRVPISMELFHGIGEFIRYAIPSAGMICLEWWSFELIILLSGLLPNPELETSVLSICLNITTTIYTIAESIGSAASTRISNALGAGNPQSARVCVYAAMILAASDAILVSSIIFACRQILGYVFSNEQDVADYVTDMVPLLSLSVILDSLYGTLSGIARGCGWQHLGAYVNLGAYYGFGIPTAAILGFWILLGGKGLWIGILTGSFCQTVMLSLITTSTNWEEQAIKARERIFQRSFSVEGGLI* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0353 481 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 466 - -
Pvu7g0353 481 CDD MATE_eukaryotic 28 464 IPR045069 GO:0042910|GO:1990961
Pvu7g0353 481 Pfam MatE 38 198 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu7g0353 481 Pfam MatE 259 421 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu7g0353 481 PANTHER PROTEIN DETOXIFICATION 13 466 - -
Pvu7g0353 481 TIGRFAM matE: MATE efflux family protein 38 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0353 Pvu-Chr7 2777627 2780568 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0353 7 2777627 2780568 Pvu7g0353 7 2777627 2780568 ECH
Pvu7g0353 7 2777627 2780568 Pvu4g1610 4 43356493 43361292 ECH