Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0352 ATGGAAAAGGGTCTCTTAATAGAGAAGGAGAGAGAGGAGGAAGAGGGTGGTTCAGGCGTAATAAGATGGAATGTGTTTGGTGAAGAGGTGAAAAGGGTCGGTTATCTAGCAGGCCCTATGGTTACTGTGACTCTGTCACAGTATTTTCTACAAATAATATCAATGATGATGGTTGGTCACTTGGGTAAGCTTGCTCTCTCCAGCACAGCCATTGCCATCTCTCTCTGTGCTGTATCTGGTTTCAGTGTCATTTTTGGAATGTCATGTGCACTGGAAACTCAATGTGGGCAAGCATATGGAGCACAGCAATACAGAAAATTTGGTGTTCAAATTTACACTGCAATTGTTTCCCTTACTTTAGCTTGTCTTCCTCTGACTCTTTTGTGGATCTACTTGGGGAAGCTGCTCATTATACTTGGCCAAGACCCTTTGATTTCACAAGAAGCTGGAAAATTTGCTCTGTGCATGATCCCTGCTCTCTTTGCTTACGCAGCACTACAGACCTTGGTTCGATTCTTTTTGATGCAAAGTCTGATCAGTCCCCTTGTCATAAGTTCCTTCATTACTCTTTGCTTCCATGTGGCTTTCAGTTGGTTAATGGTTTTTAAATCTGGACTCGGTAACTTAGGAGCAGCATTTTCTATCAGTACTTCATACTGGCTGAATGTGATTTTACTTGGATTATATATGAAATTCTCTACTCAGTGTGAAAAGACTCGAGTCCCAATTTCAATGGAACTGTTCCATGGGATTGGAGAATTCATCCGCTATGCCATTCCTTCAGCTGGAATGATTTGCCTTGAATGGTGGTCATTTGAGCTAATAATCTTGCTTTCTGGTCTTTTACCAAATCCAGAGCTAGAAACTTCAGTCTTATCCATATGTTTAAACATCACCACAACAATCTACACGATCGCAGAATCAATTGGCTCAGCTGCAAGCACTAGAATTTCGAATGCATTGGGAGCTGGAAATCCACAATCAGCACGAGTATGTGTTTATGCTGCCATGACTCTTGCAGCTTCCGAGGCCATTCTGGTGAGCTCAATCATTTTTGCTTTCAGGCAGATCTTAGGTTATGTATTTAGCAATGAGCTGGACGTGGCATTTTATGTCACTGATATGGCTCCTCTCTTAAGTCTCTCTATTATACTGGACTCCTTACATGGTACCCTTTCAGGTATTGCTAGAGGATGTGGGTGGCAGCACTTAGGAGCATATGTAAATCTTGGAGCCTATTATGGTTTTGGAATTCCAACTGCTGCTATATTGGGTTTCTGGATTCTATTAGGAGGAAAAGGGTTGTGGATTGGAATATTGACTGGTGCCTTCTGTCAAACAGTTATGTTATCTCTCATAACAGCAAGTACAAACTGGGAAGAACAGGCAATTAAAGCAAGGGAAAGAATATTTCAGAGAAGTTTTTCTGTAGAAGATGGATCAGTTTAA 1449 0.4141 MEKGLLIEKEREEEEGGSGVIRWNVFGEEVKRVGYLAGPMVTVTLSQYFLQIISMMMVGHLGKLALSSTAIAISLCAVSGFSVIFGMSCALETQCGQAYGAQQYRKFGVQIYTAIVSLTLACLPLTLLWIYLGKLLIILGQDPLISQEAGKFALCMIPALFAYAALQTLVRFFLMQSLISPLVISSFITLCFHVAFSWLMVFKSGLGNLGAAFSISTSYWLNVILLGLYMKFSTQCEKTRVPISMELFHGIGEFIRYAIPSAGMICLEWWSFELIILLSGLLPNPELETSVLSICLNITTTIYTIAESIGSAASTRISNALGAGNPQSARVCVYAAMTLAASEAILVSSIIFAFRQILGYVFSNELDVAFYVTDMAPLLSLSIILDSLHGTLSGIARGCGWQHLGAYVNLGAYYGFGIPTAAILGFWILLGGKGLWIGILTGAFCQTVMLSLITASTNWEEQAIKARERIFQRSFSVEDGSV* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0352 482 CDD MATE_eukaryotic 29 465 IPR045069 GO:0042910|GO:1990961
Pvu7g0352 482 Pfam MatE 260 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu7g0352 482 Pfam MatE 39 199 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu7g0352 482 PANTHER MULTIDRUG RESISTANCE PROTEIN 9 467 - -
Pvu7g0352 482 PANTHER PROTEIN DETOXIFICATION 9 467 - -
Pvu7g0352 482 TIGRFAM matE: MATE efflux family protein 39 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0352 Pvu-Chr7 2771864 2774445 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0352 7 2771864 2774445 Pvu7g0352 7 2771864 2774445 ECH
Pvu7g0352 7 2771864 2774445 Pvu4g1612 4 43378013 43384543 ECH