Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0346 ATGCTCTCGCTTACGCAACCTTCGTGCATTCCCAAAACCCTAAAACCCTCCGTTCCCCTTCCGTTTCCGGCCATGAAGGACCGCCGAACGCCGTCCTCCTATGGCTCCGTTTACATTCCGCCGCACCACCGTTTGCGCTCCGTCGCCAATTTCAACAACTCACCCTCTCCGGTTCGCGCCAAACCCCACGAAAACCCTACACACACCATTACTACTCTGCAACCGCCGTCGACGGAGCCAGTTCCCGATAAGGCACGTTCGCGCTTCGTTTCTGCTTATGACGACACCGTTTCGGAGGAAGGCTCCGATCGTGAATTCGAACCTCCCTCACTAGCGCGTGCTTCCAAATTTGCTTATCCGAATGCTTCGCTTAATGACAACACTGACGAGTGGAAGCGGAAATTTACCATGCTCTTAAATGACAAGAGTAAGCAAGAGTTAATCTCGAGGGAGAAAAGGGATAGGCGTGATTTTGAGCGAATAGCAGTTGTTGCAAGCAGAATGGGGTTGTATAGCCATATGTATGCTAAGGTTGTTGTCTTCAGTAAGGTCCCACTTCCAAATTACAGATATGATTTGGACGATCGGAAGCCTCAGAGGGAGGTGAGCTTGTCTATCACCACATTTACCCGTGTAAAGGCACATTTTGAGGAATATCTTAGCCAAAAAGCCAGGATGAATAAAAGCTGTTTGGATTTGTCATCTGCAAGATCAAGTAGTAATGGCAGTATTGGTATGGATGAGGGGCTTTTTGAGCAACCTGAGCCACTAGCATCAAGTAAGGCTGTTATGGAGAAAATTGTTTGGCAGAGGAGCTTACAAATGCGTGATCAGCAGCAAGCTTGGCAGGAATCTGCTGAAGGAACTAGAATGCTAGAATTTCGCAGAAGTCTCCCAGCTTATAAAAAGAAAGAAGAAATATTATCAGTCACATCAAGGAATCAGGTAGTTATCATTTCAGGCGAAACAGGTTGTGGCAAGACAACACAAATTCCACAATTTATTTTAGAATCTGAGATAGAATCAGTTCGTGGAGCTGCTTGTAATATCATATGCACACAGCCAAGACGCATTTCAGCCATGTCAGTTTCTGAAAGAGTGGCCTGTGAGAGGGGAGAGAAATTGGGCGAATCTGTTGGATATAAAGTTCGACTTGAGGGTATGAAAGGGAGAGATACCCATCTTCTCTTTTGCACCACAGGCATTTTATTAAGAAGATTACTAGCTGATAGAAAGTTAAAAGGCGTAACTCATGTTATTGTGGATGAAATTCATGAGCGTGGGATGAATGAAGATTTTCTGCTTATTATTCTTAAAGAACTCCTTCCCCGTCGACCAGAACTGAAACTAATTTTGATGAGTGCTAGCCTAGATGCAGAGCTCTTTTCTTCGTACTTTAATGGGGCTCCAACTATGTTTATTCCGGGCTTCACATACCCCGTTAAAACTCATTTTCTGGAGAACATTCTTGAAATGACGGGGTACAGATTAACTCCTTATAATCAAATTGATGATTATGGTCAAGAAAAGATGTGGAAAATGAACAGACAGGTCCCAAGAAAGAGGAAAAGTCAAATTGCTTCTGCTGTAGAGGATGCAATTAAAGCTGCTGATTTCAAAGATTACAGCTCACATACACAGGAGTCTTTGTCATGTTGGAATCCTGACTGTATTGGTTTTAGTCTCATAGAATATATTTTGTGCAATATATGTGAGAATGAAAGACCTGGTGCTGTTTTGGTTTTCATGACTGGATGGGATGATATAAACTCTCTGAAAGAGAAGCTCCTGACACATACTGTCTTGGGAGATCCAAACCGTGTTTTGTTGCTTACATGTCATGGCTCAATGGCTAGCTCAGAGCAGAGATTAATATTTGAAGAACCTGAAGCTGGAGTAAGAAAAATAGTGCTTACAACAAATATTGCTGAAACCAGTATTACAATAAATGATGTTGTTTATGTTCTTGACTGCGGAAAAGCGAAAGAAACATCATATGATGCTCTGAATAACACACCTTGTCTGCTTCCTACATGGATTTCTAAGGTTTCTTCTCAACAAAGAAGAGGAAGAGCAGGTCGGGTACAACCAGGAGAGTGTTACCATCTCTATCCTAGATGTGTGTATGATGCATTTGCGGAATATCAATTACCAGAAATTTTGAGAACACCGTTGCAATCCCTCTGTTTACAAATTAAAAGTTTAAGACTTGGAAGTATATCCGAGTTCTTGTCCAGGGCTTTGCAATCTCCTGAGATACTTGCGGTACAAAATGCAATTGAATATTTAAAAATAATTGGAGCTTTGGATGAGGATGAGAATCTCACTATTCTAGGGCGCTATTTGACAATGCTTCCCATGGAACCCAAACTTGGCAAGATGCTAATATTAGGTGCTATTTTCAATTGCCTGGATCCCATATTAACTGTTGTTGCTGGGCTTAGCGTGAGAGATCCTTTTCTTACACCATTGGATAAAAAAGATCTTGCAGAGGCTGCAAAATCTCAATTCTGTGGTGCATATAGTGACCACCTTGCACTTGTAAGGGCACATGAAGGTTGGAAAGATGCTGAAGTGGACCTGGGTGGATATGAATACTGCTGGAAAAATTTTCTTTCCTTGCAATCCATGAAAGCTATTGATGCTCTTCGGAGAGAGTTCATATGCCTGCTCAAGGATACCGGATTAGTTGATAGCAATGCAGCCAGCTGCAATGCATGGAGCTCTGATGTAAATCTTATCCGAGCAGTTATTTGCTATGGTCTATATCCTGGAATTGGTTCTGTTGTGAATAATGAGAAATCATTCTCTTTGAAAACAATGGAGGATGGTCAAGTGCTCCTATATTCGAACTCAGTGAATGCTCGGGAGACTAAAATTCCATATCCATGGCTTGTTTTTAACGAGAAGATAAAAGTGAATTCCGTTTTTCTCCGTGACTCAACAGCTGTGTCTGATTCAGTGGTGCTTCTGTTTGGTGGAAGCTTATTGAAGGGAGATGCTGATAATCACTTAAAAATGTTGGGAGGATATCTTGAGTTTTTTGTGGATCCCAGTGTTGTTGATTTGTACCAGAGTATAAGGAGAGAACTTGATGCCTTCATTCAGAGCAAACTACTTTTTCCAAGAATGGGCATACAGTGGTATCATGATCTCCTATCTGCAGTACGGCTGCTGATATCGAATGACCTATGTGAAGGTAGATTTGTATTTGGTCGCCAGGTCCTTAAACCACCAAAGAAATCTATTACGATGGCCTCAAATCCAACCTTGGTTTCAAGGACTGAGAGTGGACCTGGGGGAGATAATTCTAAAAGTCAGCTCCAAACATTGCTTACCAGATCAGGATATGCAGCACCCGTCTACAGGACTAAACAATTGAAGAACAATCAGTTTCAGGCTACAGTTGAATTCAATGGAATTCAGACAATGGGTCAACCTTGTAACAATAAAAAGAGTGCAGAAAAAGATGCTGCAGCTGAGGCATTGCAGTGGCTGATGGGTGGAAAGCAAACAGGCAGGGAGTATATCAAACACTTGTCAATGTTAATTAAGAAAAGTAAGAAGGATCACAATTAA 3579 0.4194 MLSLTQPSCIPKTLKPSVPLPFPAMKDRRTPSSYGSVYIPPHHRLRSVANFNNSPSPVRAKPHENPTHTITTLQPPSTEPVPDKARSRFVSAYDDTVSEEGSDREFEPPSLARASKFAYPNASLNDNTDEWKRKFTMLLNDKSKQELISREKRDRRDFERIAVVASRMGLYSHMYAKVVVFSKVPLPNYRYDLDDRKPQREVSLSITTFTRVKAHFEEYLSQKARMNKSCLDLSSARSSSNGSIGMDEGLFEQPEPLASSKAVMEKIVWQRSLQMRDQQQAWQESAEGTRMLEFRRSLPAYKKKEEILSVTSRNQVVIISGETGCGKTTQIPQFILESEIESVRGAACNIICTQPRRISAMSVSERVACERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRKLKGVTHVIVDEIHERGMNEDFLLIILKELLPRRPELKLILMSASLDAELFSSYFNGAPTMFIPGFTYPVKTHFLENILEMTGYRLTPYNQIDDYGQEKMWKMNRQVPRKRKSQIASAVEDAIKAADFKDYSSHTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDINSLKEKLLTHTVLGDPNRVLLLTCHGSMASSEQRLIFEEPEAGVRKIVLTTNIAETSITINDVVYVLDCGKAKETSYDALNNTPCLLPTWISKVSSQQRRGRAGRVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEILAVQNAIEYLKIIGALDEDENLTILGRYLTMLPMEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCGAYSDHLALVRAHEGWKDAEVDLGGYEYCWKNFLSLQSMKAIDALRREFICLLKDTGLVDSNAASCNAWSSDVNLIRAVICYGLYPGIGSVVNNEKSFSLKTMEDGQVLLYSNSVNARETKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGSLLKGDADNHLKMLGGYLEFFVDPSVVDLYQSIRRELDAFIQSKLLFPRMGIQWYHDLLSAVRLLISNDLCEGRFVFGRQVLKPPKKSITMASNPTLVSRTESGPGGDNSKSQLQTLLTRSGYAAPVYRTKQLKNNQFQATVEFNGIQTMGQPCNNKKSAEKDAAAEALQWLMGGKQTGREYIKHLSMLIKKSKKDHN* 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0346 1192 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL 81 1113 - -
Pvu7g0346 1192 Gene3D - 561 715 IPR027417 -
Pvu7g0346 1192 CDD DEXHc_RHA-like 314 474 - -
Pvu7g0346 1192 Pfam Double-stranded RNA binding motif 1104 1166 IPR014720 -
Pvu7g0346 1192 SMART helicmild6 590 696 IPR001650 -
Pvu7g0346 1192 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 914 995 IPR011709 -
Pvu7g0346 1192 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 308 475 IPR014001 -
Pvu7g0346 1192 CDD SF2_C_RHA 553 704 - -
Pvu7g0346 1192 SMART DRBM_3 1104 1167 IPR014720 -
Pvu7g0346 1192 PANTHER ATP-DEPENDENT RNA HELICASE 81 1113 - -
Pvu7g0346 1192 SMART ha2_5 758 848 IPR007502 GO:0004386
Pvu7g0346 1192 Pfam Helicase conserved C-terminal domain 564 695 IPR001650 -
Pvu7g0346 1192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 304 862 IPR027417 -
Pvu7g0346 1192 SUPERFAMILY dsRNA-binding domain-like 1098 1169 - -
Pvu7g0346 1192 MobiDBLite consensus disorder prediction 1 24 - -
Pvu7g0346 1192 Gene3D - 738 840 - -
Pvu7g0346 1192 Gene3D - 1082 1171 - -
Pvu7g0346 1192 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1103 1168 IPR014720 -
Pvu7g0346 1192 MobiDBLite consensus disorder prediction 1088 1107 - -
Pvu7g0346 1192 SMART ultradead3 269 484 IPR014001 -
Pvu7g0346 1192 MobiDBLite consensus disorder prediction 53 78 - -
Pvu7g0346 1192 MobiDBLite consensus disorder prediction 53 83 - -
Pvu7g0346 1192 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 562 736 IPR001650 -
Pvu7g0346 1192 Gene3D - 256 476 IPR027417 -
Pvu7g0346 1192 Pfam Helicase associated domain (HA2) 759 832 IPR007502 GO:0004386
Pvu7g0346 1192 Pfam DEAD/DEAH box helicase 306 458 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0346 Pvu-Chr7 2698230 2710226 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0346 7 2698230 2710226 Pvu7g0346 7 2698230 2710226 ECH