Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0276 ATGAGTACAGCTAAGAACGCCGCAATCGCTGTTGGGGGCAAAACGGCAAGAGCATGCGATAGCTGTATAACGAAACGGGCGCGTTGGTACTGTGCTGCCGACGATGCTTTTCTCTGCCAAGCTTGTGACTCTTCGGTTCACTCCGCCAATCCCTTGGCTCGCAGACACGAACGAGTCCGCTTGAAAACGGCGTCGTACAAGTCCACCGACGAACAACAACAACAACCTCCCACGTGGCACACTAAGAAAGCTCGAACGCCCAGACACGGGAAACACTCTCGTAGCAGCAACCCCTTCCATCTGGTGCCTGAAGTGGGGTCGGAAGAGGTGAACTCCAATGAAGAGAACGAGGAGCAGCTTCTTTATAGAGTTCCCATATTCGACCCTTTTCTTGCTGAGCTATGTGGGACTAATAGTTCTTCTCCTTCTTCGGTGACTTCAACTGATCAAGGAGCAGCAGCTGCTGTGGCCGAGGGTGAAAACAAAGGGGTGCAGAGCAATTTTTTTTATCAAAGTAATAATGAGATGGAAAACTTGCATGGGATGCTTCCTTCGGATGCAGAACTTGCTGAGTTTGCTGCTGATGTTGAGAGTTTATTGGGTAGGGGGCTTGAAAACGAGTGCGTGGGGATGGAGGATTTGGGACTCATTGATGCGAAGGAGGAGGAGTGTTCGGAGGGTAGTGGGAAGGTGAAGGTGGAAGAAGAGAGCCCTGAGATGGAGATGGAGATGGTGGGAAGAGATGTATCATTTGAGTTGAGCTTTGATTATGAGACGTGTGAAGAGGTTAAGGAGAATGTTTGTGATTTGGAATTTGGCAAGGAGGAGGAGAAGGAAGAAGAAATGATGAAAAAGAAGAAGATATCGTTGCAGCTTGATTACGAGTCCGTGATTACCGCCTGGGCTAGCCAAAAGTCTCCCTGGACCACTCCTCACAAACCAAACTTGGACCCCGACGAGTGCTGGCACCATTGCATGGAAAGTTGTGGGACGGGAATGGACGATCCTTATGGTGAAGTGGGTGGATTTGGGATTCATCCAATGATAAATGACGGCGGCAGAGAAGCGAGAGTGTCAAGGTACAGAGAAAAGCGCAGAACAAGGTTGTTCTCCAAGAAAATAAGGTACGAGGTTAGGAAATTGAATGCAGAGAAGAGACCCAGAATGAAGGGGAGGTTCGTCAAGAGGGCTTCCTTTGCACCACCAACATTTCCTTTGCTAAATCACTAA 1230 0.4902 MSTAKNAAIAVGGKTARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKTASYKSTDEQQQQPPTWHTKKARTPRHGKHSRSSNPFHLVPEVGSEEVNSNEENEEQLLYRVPIFDPFLAELCGTNSSSPSSVTSTDQGAAAAVAEGENKGVQSNFFYQSNNEMENLHGMLPSDAELAEFAADVESLLGRGLENECVGMEDLGLIDAKEEECSEGSGKVKVEEESPEMEMEMVGRDVSFELSFDYETCEEVKENVCDLEFGKEEEKEEEMMKKKKISLQLDYESVITAWASQKSPWTTPHKPNLDPDECWHHCMESCGTGMDDPYGEVGGFGIHPMINDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAPPTFPLLNH* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0276 409 MobiDBLite consensus disorder prediction 64 101 - -
Pvu7g0276 409 CDD Bbox1_BBX-like 18 61 - -
Pvu7g0276 409 Pfam B-box zinc finger 16 59 IPR000315 GO:0008270
Pvu7g0276 409 MobiDBLite consensus disorder prediction 66 81 - -
Pvu7g0276 409 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 402 - -
Pvu7g0276 409 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 6 1 402 - -
Pvu7g0276 409 SMART bboxneu5 14 61 IPR000315 GO:0008270
Pvu7g0276 409 Pfam CCT motif 354 396 IPR010402 GO:0005515
Pvu7g0276 409 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
Pvu7g0276 409 ProSiteProfiles CCT domain profile. 354 396 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0276 Pvu-Chr7 2043979 2045720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0276 5 396 C2C2-CO-like Transcription Factor Family AT1G25440 47.642 9.97e-105 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Pvu7g0276 zf-B_box 8.3e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0276 7 2043979 2045720 Pvu7g0276 7 2043979 2045720 ECH