Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0274 ATGCCCGAGTCTCGGAAACAACCGGCTTCTAAACCGAAGCAGAAGCCTTGCCACTCCCTGCAGGAGTCCAAATCGATGAGAAAACTTCGTATAGTTTACGACGATCCTGATGCCACTGATTCATCCGACGATGAGTCAGAGTGGATGCAGAAACAGAAAAAAACAAAGAGAAGCCTTTGTGAGATCCCTCTTCCCCCTCTTCCTCAAACTTTCACCTCTCCCGAAACCACTTCCTTCGAGGTGAATAGCAACATCAATGCAGTGAGGGTGAAGGTTTGCATTGAAGGTCAACCCCAGAGTAGGAAGAGGGTTTTGACCCAAACCCCATCAGCGAGGAGGAACACTTCTGGGAAATACAGAGGTGTTAGGCAAAGAAAATGGGGTAAATGGGCTGCTGAGATTCGTGACCCTTTCCAGAGTACCCGCATATGGCTTGGTACTTTCAACACTGCAGAAGAGGCCTCTGAAGCCTACGAGGCCAGACGGCTTGAGTTTGAAGCCATGGCTAAGGCCCGAGCCTACAAAAATGTTTCTGAGCCTTTGCCCACAACTTCTGATAAGAGTATATGCTGTAACTCTTCAGATGCTGCTGCTGCCGTGTCTGTGTCTGAGAAGTTTTCTACTACCTTTGATGACTCAGATAGTGTACTGTCACATCCATCACCTTCTTCTGTGCTTGAGTTGGATTCTTCAGCTTCCAAACCCATTGACAAGGGTAATCTTTCTAATGAAGAAGCTGCAGAGGCTAATGATTTGGTTGCTGAATTAGCTGAACTGGAAATTCCAGATTTGAGTCTTTTGAACTCACCATCACCATTCGACCGTGCTACTGCTGCTGCTCTTCCGTCTGGGACTGAGCCAGACTTTGGACTTGATTTTGATTTTGTATCATTTGAGGATTATGGTCAAGGTTTTGATGATTTTGGTGGCTTGGAAGATATCAACATTTATGGGTTTGATGACAATGAGCCTAGTGAGCTTCCTGATTTCGATTTTGGCGATTTCTGTGCTGATGAGTTTGCTGGTTGGACCGAGGAGCCCCTCAACATACCTTGTGCCTAA 1062 0.4642 MPESRKQPASKPKQKPCHSLQESKSMRKLRIVYDDPDATDSSDDESEWMQKQKKTKRSLCEIPLPPLPQTFTSPETTSFEVNSNINAVRVKVCIEGQPQSRKRVLTQTPSARRNTSGKYRGVRQRKWGKWAAEIRDPFQSTRIWLGTFNTAEEASEAYEARRLEFEAMAKARAYKNVSEPLPTTSDKSICCNSSDAAAAVSVSEKFSTTFDDSDSVLSHPSPSSVLELDSSASKPIDKGNLSNEEAAEANDLVAELAELEIPDLSLLNSPSPFDRATAAALPSGTEPDFGLDFDFVSFEDYGQGFDDFGGLEDINIYGFDDNEPSELPDFDFGDFCADEFAGWTEEPLNIPCA* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0274 353 SUPERFAMILY DNA-binding domain 118 165 IPR016177 GO:0003677
Pvu7g0274 353 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 12 353 - -
Pvu7g0274 353 MobiDBLite consensus disorder prediction 210 241 - -
Pvu7g0274 353 Pfam AP2 domain 118 167 IPR001471 GO:0003700|GO:0006355
Pvu7g0274 353 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Pvu7g0274 353 PRINTS Ethylene responsive element binding protein signature 141 157 IPR001471 GO:0003700|GO:0006355
Pvu7g0274 353 ProSiteProfiles AP2/ERF domain profile. 118 178 IPR001471 GO:0003700|GO:0006355
Pvu7g0274 353 MobiDBLite consensus disorder prediction 210 238 - -
Pvu7g0274 353 SMART rav1_2 118 181 IPR001471 GO:0003700|GO:0006355
Pvu7g0274 353 MobiDBLite consensus disorder prediction 1 56 - -
Pvu7g0274 353 CDD AP2 118 150 IPR001471 GO:0003700|GO:0006355
Pvu7g0274 353 MobiDBLite consensus disorder prediction 17 37 - -
Pvu7g0274 353 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 12 353 - -
Pvu7g0274 353 Gene3D AP2/ERF domain 117 176 IPR036955 GO:0003700|GO:0006355
Pvu7g0274 353 PIRSF PTI6 4 275 IPR017392 GO:0003700
Pvu7g0274 353 PIRSF PTI6 278 343 IPR017392 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0274 Pvu-Chr7 1987568 1990173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0274 11 352 AP2-EREBP Transcription Factor Family AT1G68550 35.411 6.37e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pvu7g0274 AP2 9.3e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0274 7 1987568 1990173 Pvu7g0274 7 1987568 1990173 ECH