Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0258 ATGCAAAGCTTCAACCCAACCGAATCAGAATCAACCTCTCCACTCTATTCCCACTCTTCCTTCATTCACCGGGGAAATGACACCAACCGAAATCCCACGCGCTTCTCTGATATTCAGCATTCTTTTCGACAGCACGATGCTGTTGATTTAAGTTCAAGTTCTGTGTTTGGTGCGAAGTCGAACAATATGGCTGTTGTTGCAAGCAACTTGCAGTGTGGGACATTCAACACGAACCTTGGAGGTGCAGAGTTTGCTTCGACGGTTGTGGGGTGTGTTGAGACAGAGTCTCAACACATATATCAGAGAGGAAACAGTAGCGCCACCATGCCCATGGGGAACCAGTATGTTGAGAAATGGGCAGATGAAAGCCAACACACTGAAGATACTTGCACGGATATCGACACCGATGATAAGAACCAATGTTTCTCTACCGTGTCCTGGGGCAATGGAGTTGGGGACGGGGCACTTGTAGTGGTGGACTCCCAGGATCAAACTAAGATTAAGGCTAAACCTGAAGACCAGAAGACTGTACGTAGGCTAGCTCAGAATCGGGAGGCTGCAAGGAAGAGTCGGTTGAGGAAAAAGGCATATGTGCAACAGTTGGAGAACAGTCGAGTCAGGCTTGCACAATTAGAACAAGATCTTCAACGGGCACGTCAGCAGGGTGTTCATATTGCGAGTGGAGTCACGGGGGATCGCGGTCATTCAGTTGTTGGAAATGGCGCCTTAGCATTTGACATGGACTATGCCCGTTGGGTGGATGAGCATCAACGGCTGATCAATGACCTAAGATCAGCTATAAATTCTCGAATGGGTGATAATGAACTGCATCTTCTTGTTGATGGAGTCATGGCACATTACGATGATTTATTTAGGTTGAAGAGCATAGGGGCAAAGGCTGATGTATTTCACATACTTTCTGGGATGTGGAAGACTCCTGCAGAAAGGTGCTTCATATGGCTTGGTGGATTTCGTTCATCTGAACTTCTCAAGATAGTTAGAAACCAGCTTGAGCCATTAACGGAAGAACAGTTGATGGGCATTTACAATCTGCAACAGTCTTCCCAGCAGGCTGAGGATGCATTATCACAAGGCATGGAAGCATTGCAGCAGTCTCTTTCAGAGACACTCTCATCTTCCTGCCAGGGACCCTCTGGTTCTGGAAATGTTGCTGAGTACATGGGCCAAATGGCCATTGCATTGGGCAAGCTTGCCACACTAGAGAGTTTCCTTCATCAGGCTGATCTCTTGAGGCAACAAACTCTGCAGCAGATGCGTAGGATTTTAACTACCTTCCAAGCTGCGCGGGCACTCCTTGTCATAAATGATTACGTTTCACGACTCAGAGCTCTTAATTCTCTATGGTTAGCGTGCCCCAGAGAGTACTAG 1389 0.4737 MQSFNPTESESTSPLYSHSSFIHRGNDTNRNPTRFSDIQHSFRQHDAVDLSSSSVFGAKSNNMAVVASNLQCGTFNTNLGGAEFASTVVGCVETESQHIYQRGNSSATMPMGNQYVEKWADESQHTEDTCTDIDTDDKNQCFSTVSWGNGVGDGALVVVDSQDQTKIKAKPEDQKTVRRLAQNREAARKSRLRKKAYVQQLENSRVRLAQLEQDLQRARQQGVHIASGVTGDRGHSVVGNGALAFDMDYARWVDEHQRLINDLRSAINSRMGDNELHLLVDGVMAHYDDLFRLKSIGAKADVFHILSGMWKTPAERCFIWLGGFRSSELLKIVRNQLEPLTEEQLMGIYNLQQSSQQAEDALSQGMEALQQSLSETLSSSCQGPSGSGNVAEYMGQMAIALGKLATLESFLHQADLLRQQTLQQMRRILTTFQAARALLVINDYVSRLRALNSLWLACPREY* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0258 462 MobiDBLite consensus disorder prediction 1 35 - -
Pvu7g0258 462 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 42 461 - -
Pvu7g0258 462 Gene3D - 174 225 - -
Pvu7g0258 462 SMART brlzneu 171 242 IPR004827 GO:0003700|GO:0006355
Pvu7g0258 462 Pfam bZIP transcription factor 175 212 IPR004827 GO:0003700|GO:0006355
Pvu7g0258 462 ProSiteProfiles DOG1 domain profile. 242 458 IPR025422 GO:0006351|GO:0043565
Pvu7g0258 462 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 217 IPR004827 GO:0003700|GO:0006355
Pvu7g0258 462 SUPERFAMILY Leucine zipper domain 175 218 IPR046347 GO:0003700|GO:0006355
Pvu7g0258 462 Pfam Seed dormancy control 260 334 IPR025422 GO:0006351|GO:0043565
Pvu7g0258 462 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Pvu7g0258 462 PANTHER TRANSCRIPTION FACTOR TGA9 42 461 - -
Pvu7g0258 462 Coils Coil 194 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0258 Pvu-Chr7 1859896 1863283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0258 12 461 bZIP Transcription Factor Family AT1G68640 54.409 8.66e-156 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu7g0258 DOG1 2.5e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0258 7 1859896 1863283 Pvu7g0258 7 1859896 1863283 ECH