Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0535 ATGTCTTTCGAAGATGTTAAGGCTGCTGCTAGTGAGTTCGCTAAGGGATTTAATCACAGTTACTACCACCCGTTGCACATAGCAATACTAAAAGGAGATTGGCAATCTACAAAGGCTTTTCTTGACAATGATCCAAGTGCATGGACTGCTAAGATCACCATACTTGGCAGGACTGCGCTGCATGTAGCAGCTGTAGGAGGGCAGTGGCCAATTGTTGAGAAGTTGGTGCAACATGTTCCTGCACAAGTACTTGAAGAGCTGGACTTGATGGGTTGTACTTGCCTGCACTATGTTGCAATGGGGGAAAGCAGAAGTGCTGCCGAGGCATTGGTGGCTAAAAATCCCTCTCTGACACAACTCACTGACTTTAAAGGATTCACACCACTTATCTACAGTATTACCTCTGCTAGATGCAAAGAAATGGTGTGGTACTTTGTTTTGAATACTACAGACGAGAGACCTGGCAGTCCTTTCACTGGTCCTTCTGCTGGTCAACTTATTGCTTTGCTTACAGCTGCAGGATTTCATGATGTCACTATATATCTTCTCCAGCGCTACCCAAATTTGGCTACTCTATCAGACTCAAAGGGAAGCATTATACTTAATGTTTTGTCAAAATTGCCCTCGGACTTTCAAAGTGGAAATAAGCTTGGGTTTTGGAAAAGATGCATTTATCACTGTGTGCCAGATGAACTTGATTTTTTACCACCAAGTCATTTGAGAGGAAATTTGAAAAATTCTTTGGGGAATTCAAGCCATCATCACCAATCTTATTTTGGAAGTACAATGTGGAATGGCATTCAGAATATTGTTCCTGGTATAAAGTTAGTCAGAGAGGCTAAGTTGAGACACGTATCTGCTGCGAGATTGGTGGAACTCGTTTGCACACAGGTTTCAAATTTGAATGATGCTGAATTCTGGCAGTCTTTTGTGAATGCAGACATTGTTTTCAATGCCTCATCATCAGGCATAGTTGAAATTTTAAGGATCTGTTTCCAGTTTTTTCCTGATTTGGTTTGGACTCACATGCCAAATGAAGGATATGTAGCTCAAACTGCCATCAAGTATAGGCAAGAGAAGGTTTTTAGTCTTCTATGCAAGATGCCTATAGTTTGCAAGTTTTTAGTCCTGGCATTAGATGAATCACAAAACTCCACATCACATCTAGCAGCAAGGTTTGCTTCTCCTCAACAGGCATCAATTTCTGGTGCAGCCTTTCAAATGCAAAAAGAGTTGCAGTGGTTTAAGGAAGTAGAGAAATGGGATCACCCTCTTCATAAAGAAGTTAAAAACAAAGATGGTAAAACACCTTGGCAATTGTTCAGGGAAGAGCATAAGCCCTTGCTTGAAGAAGCAAAGACTTGGATGAAAGATACATCAAACTCTTGTATGTTGGTGGCAACTCTTATTGCTACAGTTGTCTTTGCTGCTTCCATAACAGTACCTGGTGGAAACAACCAAGAGAAAGGATTTCCATTATTCTTGTCAGATAGCACATTCATGGTGTTCATTGTGTCAGATACATTAGCTTTGTTTTCCTCCATGGTTTCCCTTTTGATGTTTTTATCAATTCTAACTGCACATTATGCAGAAGAAGATTTTCTCAAGAGATTACCTGAGAGAATAATATTGGGTCTGGCTTCTTTGTTCTTTTCCATTGTAACTACAATGATAGCATTTGGTGCAGGTCTGGATTTGTTGCTAAGGGAGAGACTGAAATGGGTGTCAATCCCAATTGCTCTTCTGGCATGTGTTCCAGTTGCCCTATTTGCAAGGCTTCAACTTCCCTTGTTCATACAAATGATCATATCAACTTATGGTTCTTGTATATATCATCATCAAAGTCTTTGGTAA 1854 0.404 MSFEDVKAAASEFAKGFNHSYYHPLHIAILKGDWQSTKAFLDNDPSAWTAKITILGRTALHVAAVGGQWPIVEKLVQHVPAQVLEELDLMGCTCLHYVAMGESRSAAEALVAKNPSLTQLTDFKGFTPLIYSITSARCKEMVWYFVLNTTDERPGSPFTGPSAGQLIALLTAAGFHDVTIYLLQRYPNLATLSDSKGSIILNVLSKLPSDFQSGNKLGFWKRCIYHCVPDELDFLPPSHLRGNLKNSLGNSSHHHQSYFGSTMWNGIQNIVPGIKLVREAKLRHVSAARLVELVCTQVSNLNDAEFWQSFVNADIVFNASSSGIVEILRICFQFFPDLVWTHMPNEGYVAQTAIKYRQEKVFSLLCKMPIVCKFLVLALDESQNSTSHLAARFASPQQASISGAAFQMQKELQWFKEVEKWDHPLHKEVKNKDGKTPWQLFREEHKPLLEEAKTWMKDTSNSCMLVATLIATVVFAASITVPGGNNQEKGFPLFLSDSTFMVFIVSDTLALFSSMVSLLMFLSILTAHYAEEDFLKRLPERIILGLASLFFSIVTTMIAFGAGLDLLLRERLKWVSIPIALLACVPVALFARLQLPLFIQMIISTYGSCIYHHQSLW* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0535 617 Pfam Domain of unknown function 454 564 IPR026961 -
Pvu6g0535 617 PANTHER CASKIN 28 607 - -
Pvu6g0535 617 Gene3D - 5 157 IPR036770 -
Pvu6g0535 617 PANTHER ANKYRIN REPEAT PROTEIN 28 607 - -
Pvu6g0535 617 SUPERFAMILY Ankyrin repeat 24 261 IPR036770 -
Pvu6g0535 617 SMART ANK_2a 20 51 IPR002110 GO:0005515
Pvu6g0535 617 SMART ANK_2a 55 84 IPR002110 GO:0005515
Pvu6g0535 617 SMART ANK_2a 90 119 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0535 Pvu-Chr6 16606733 16611282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0535 411 588 Miscellaneous Gene Families AT3G12360 27.222 1.86e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0535 6 16606733 16611282 Pvu6g0535 6 16606733 16611282 ECH