Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0115 ATGATGATGATGATGTTTGATGAGATGGGGTTTTGCAATGATTTGGATCCTGTACCTGGTACCCTTGGAGAAGAAAATATTACCTCTGGGCAGACTGATCCAGAGACGATAGTTGAGGATGATTTTAGTGATGAAGAAATTGGAGTAGATGAACTTGAGCACAGGATGTGGAAGGACAAAATGCTTCTCAAGAGATTGAAGGAGCAAAGTAAATCTAAAGAAGGAATTGATGCTGTGAAGCAGAGGCAGTCGCAAGAACAAGCAAGGAGGAAGAAGATGTCAAGGGCTCAGGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGTAAGGCCCAAGGATTTGTTTATGGGATAATTCCTGAGAAGGGGAAACCAGTGACTGGAGCATCTGATAACCTTCGTGAATGGTGGAAGGATAAGGTGAGGTTTGATCGTAATGGACCTGCTGCTATAACAAAGTACCAAGCTGATAATGCAATCCCCGGAAGGAATGATGGATGCAATTCAATTGGTCCAACTCCACATACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTCATGCAACACTGTGATCCTCCTCAGAGGCGGTTTCCACTGGAGAAGGGTATTCCTCCTCCATGGTGGCCCACAGGAAATGAAGTATGGTGGCCACAAATTGGTTTGCCTAAAGATCAAAGTCCTCCTCCTTACAAGAAGCCCCATGACCTGAAGAAGGCATGGAAAGTCGGTGTTCTGACTGCAGTTATAAAGCACATGTCCCCTGATATTGCCAAAATTCGCAAGCTTGTGAGGCAGTCCAAGTGCCTTCAAGATAAGATGACAGCCAAGGAAAGTGCAACCTGGCTGGCAATCATCAATCAAGAGGAGGCCTTGGCAAGAGAGCTTTACCCTGATTATATCCCTCCATTAGCCTCAGCAGGAGGTAGTGGATCTTTGGTGGTGAATGATAGCAATGAGTATGATGTTGAAGGGGGTGAGGATGAGGCTAACTTTGATGTGGAAGACAGGAAACATGAGAATATTCACATGTCCAATCTGGGGATGGAGAGAATGAGGGGAACTGTGGTGGTTCAGCAGCCCTCTTTTTCAATCAAGGGAGAGGCAGTTACAAATATGGATCTTCTTAGGAAGAGGAAGGTCTCTTCTAATGACTTTAACATGATGGATTTGAAAAATTACACATGTGAACAGCCTCAGTGCCCTTACAGTCAAGTCCAGCTTGGTTTCCCTGACAGAATCTCTAGGGACAATCATAGGTTAATTTGTGCATTTAGAGGTCCTTCAGATTTTGGGGGTCCAAATTTTCATGTTAATGAGGTAAAGCCAGTGATATACCCCCACTCATTTGTTCAACCCAAGCCTACTACTGCTCAATCTGCTAACATGGTTCCGCCTGTAATTGATCTTACTGGACTTGAAGTTTCTGAAGATGGCAAGAAAAGGATAAGCGACCTTATGAGTAACTATGATACAAATGTTCAAGGCAACAGCAAGAACATTAGTTCCTCCTGTAATCGTGTAGCTGCCGAAGTTTTGAACCTTACTCAGCATGGCATGCAGCAGCAGCATGACAACTTCATTCGCAGTCGAGGAAACACTATGGAAGGAAACGTCTTTGACGAAGCTACCATGTCAAATAATCATCATACTTTTGCAAGAGATGAATGCCAATTTGACAGGTTCAAAGCTTTGAATACCCCCTTTGAGACCAATCACAACAACAGTAACTTCCACTCCATGTTTGGGTCCTTTTGTGATTTGGCATCATTTGATTTCAAGGAGGATATGCAAGGAGTTATAGGCATGGATGTTGTTCAGAAACAGCCAGATTTTTCTGTATGGTACCAGTGA 1875 0.4389 MMMMMFDEMGFCNDLDPVPGTLGEENITSGQTDPETIVEDDFSDEEIGVDELEHRMWKDKMLLKRLKEQSKSKEGIDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNAIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPTGNEVWWPQIGLPKDQSPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYIPPLASAGGSGSLVVNDSNEYDVEGGEDEANFDVEDRKHENIHMSNLGMERMRGTVVVQQPSFSIKGEAVTNMDLLRKRKVSSNDFNMMDLKNYTCEQPQCPYSQVQLGFPDRISRDNHRLICAFRGPSDFGGPNFHVNEVKPVIYPHSFVQPKPTTAQSANMVPPVIDLTGLEVSEDGKKRISDLMSNYDTNVQGNSKNISSSCNRVAAEVLNLTQHGMQQQHDNFIRSRGNTMEGNVFDEATMSNNHHTFARDECQFDRFKALNTPFETNHNNSNFHSMFGSFCDLASFDFKEDMQGVIGMDVVQKQPDFSVWYQ* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0115 624 MobiDBLite consensus disorder prediction 72 93 - -
Pvu6g0115 624 Coils Coil 49 69 - -
Pvu6g0115 624 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 3 623 - -
Pvu6g0115 624 Gene3D - 82 159 IPR023278 GO:0003700|GO:0005634
Pvu6g0115 624 Gene3D - 174 307 IPR023278 GO:0003700|GO:0005634
Pvu6g0115 624 SUPERFAMILY DNA-binding domain of EIN3-like 176 300 IPR023278 GO:0003700|GO:0005634
Pvu6g0115 624 Pfam Ethylene insensitive 3 50 297 IPR006957 GO:0005634
Pvu6g0115 624 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 3 623 IPR006957 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0115 Pvu-Chr6 5689492 5692769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0115 4 623 EIL Transcription Factor Family AT3G20770 58.769 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Pvu6g0115 EIN3 1.5e-129 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0115 6 5689492 5692769 Pvu8g2142 8 51846363 51849958 PCT