Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0114 ATGATGATGATGTTTGAGGAGATGGGGTTTTGTAATGATTTGGATACGATGTCTACTGTCCTTGGGGAAGAGGATATCACCGCCCGGCAAACTGATCCAGAGGCGATAGTTGAGGATGATTTCAGTGATGAAGAAATTGGGGTAGATGAGCTTGAAAGGAGGATGTGGAAGGACAAAATGCGTCTCAAGCGATTGAAGGAACAAAGTAAATCTAAGGAAGGAATCGATGCAGTGAAGCAAAGACAGTCTCAAGAACAGGCAAGGAGGAAAAAGATGTCGAGAGCTCAAGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGTAAGGCCCAAGGATTTGTTTATGGGATAATTCCCGAGAAGGGGAAACCAGTGACTGGAGCATCTGATAATCTTCGTGAATGGTGGAAGGATAAAGTCAGATTCGATCGAAATGGTCCAGCTGCCATAGCCAAATACCAAGCTGATAATGCAATCCCCGGGAGGAATGATGGATGCAATTCAATTGGTCCAACTCCACATACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTCATGCAACACTGTGATCCTCCTCAGAGGCGGTTCCCGTTGGAAAAGGGTATTCCTCCACCATGGTGGCCTAGTGGAAATGAAGAGTGGTGGCCCCAAATTGGTTTGCCTAAGGATCACAGTCCCCCTCCTTACAAGAAGCCCCATGACCTAAAGAAGGCATGGAAAGTTGGCGTTTTGACTGCAGTCATCAAGCACATGTCCCCTGATATTGCCAAAATTCGCAAGCTTGTGAGGCAGTCTAAGTGCCTCCAGGATAAGATGACAGCCAAGGAAAGTGCAACCTGGCTGGCAATCATCAATCAGGAGGAGGCCTTGGCAAGAGAGCTTTACCCTGATTATATCCCTCCATTAGCCTCAGTTGGAGGTAGTGGATCTTTGGTGGTCAATGATAGCAATGAGTATGATGTTGAAGGATGTGAGGATGAACCTAACTTTGATGTGGAAGACAGGAAACATGAGAATGTTCACACAACCAATCTGGGGATGGAGAGAATGAGGGGAACTCTGGCAGGTCAGCAGCCCCCTTTTTCAATCAAGGGAGAGGCTGTTACAAATTTGGATTTCATGAGGAAGAGGAAGGTTTCAAATGACTTTAACGTGATGGATATGAAGATTTACACATGTGAACAGCCTCAGTGCCCTTATAGTCAAGTTCGCCTTGGTTTTCCCGACAGAATTTCCAGGGACAATCATCAGTTGATTTGTGCATATAGAGGTCCTTCAGATTTTGGGGGTCCAAATTTTCATGTTAATGAGGTGAAGCCTATCATATACCCCCAGTCCTTTGTTCAACCCAAGTCTACTGCTCAGTCTGCTAACATGGTCCCGCCTGTAATTGATCTTACTGGGCTTGAAGTTTCAGAAGATGGTCAGAAAATGATCAGTGACCTTATGACTAACTATGAAACAAATGTTCAAGGCAACAAGAACATAAGTTCATGTAATCGCATCATGGCTGCAGAGAATTCCTGCCTTCGTCAGCATGGCATGCAGCAACCACATGACAACTTCATTCGTGGGCAAGGAATCACTATGGAAGGAAATATCTTTGATGAGCCCAACATGTCCAATAATCATCACATATTTGCTAGAGAAGAAGGCCAAATTGAGCGGTTCAAAGCTATGAATGCTCCCTTCGAGACCAATCACAACAACAACAATAACTTCAATTCAATGTTTGGGTCCTTTTGTGATTTGGCATCATTTGATTTCAAGGAGGACATGCAAGGAGCTGAGATGGATGGTATTCAGAAACAGCCAGATTTTTCGATATGGTATTAG 1860 0.4462 MMMMFEEMGFCNDLDTMSTVLGEEDITARQTDPEAIVEDDFSDEEIGVDELERRMWKDKMRLKRLKEQSKSKEGIDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPSGNEEWWPQIGLPKDHSPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYIPPLASVGGSGSLVVNDSNEYDVEGCEDEPNFDVEDRKHENVHTTNLGMERMRGTLAGQQPPFSIKGEAVTNLDFMRKRKVSNDFNVMDMKIYTCEQPQCPYSQVRLGFPDRISRDNHQLICAYRGPSDFGGPNFHVNEVKPIIYPQSFVQPKSTAQSANMVPPVIDLTGLEVSEDGQKMISDLMTNYETNVQGNKNISSCNRIMAAENSCLRQHGMQQPHDNFIRGQGITMEGNIFDEPNMSNNHHIFAREEGQIERFKAMNAPFETNHNNNNNFNSMFGSFCDLASFDFKEDMQGAEMDGIQKQPDFSIWY* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0114 619 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Pvu6g0114 619 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
Pvu6g0114 619 Coils Coil 48 68 - -
Pvu6g0114 619 MobiDBLite consensus disorder prediction 65 91 - -
Pvu6g0114 619 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 2 619 - -
Pvu6g0114 619 Pfam Ethylene insensitive 3 49 296 IPR006957 GO:0005634
Pvu6g0114 619 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 2 619 IPR006957 GO:0005634
Pvu6g0114 619 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0114 Pvu-Chr6 5490545 5493674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0114 3 619 EIL Transcription Factor Family AT3G20770 59.568 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Pvu6g0114 EIN3 2.8e-130 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0114 6 5490545 5493674 Pvu6g0114 6 5490545 5493674 ECH
Pvu6g0114 6 5490545 5493674 Pvu5g0131 5 1035395 1038835 ECH