Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0073 ATGAGCAACAATCCAACACCAAGCTCTTACTCAGACTCCGTTTCCTCCGAGGACCACCACATTGGCTCCTCCTCCCAACGCAGTCCACCAGCAGCAGCAGCCACCTCCACCAACCAGCAAGTCACAACCCCATCTTCAAGGAAGCCACGTGGTCGGCCACTAGGTTCCAAGAACAAGTCAAGGTCCATCCCTCTGCCAGTGTCCCTACCAACTGAGCCCTTCGTAAACGTCCTGGTAGTGAACGTGGATCCAAATAGGGACATCATGGAGTGCATCCTTGACATTGCTCACCAAGGCCAGGTCAGCCTCTCGGTCCTTAGTGCCTTTGGCACCATCAATAGCGTAACCCTTCGCAACTCAACCCATGGTGCCCCATACCTCGTGCTCCATGGCCCATTCAAATTAGTCTCCCTTACTGGGTCCTACTTATACAACAACCACTACACCCTTCACCTTGGAGCCACCCCTCCTTCTCCCTTATCCTTTGGAATCAACTTCTCCACCACTACAGGCGAAATATTTACAGGCGTTATCGGTGGCAGAGTCGTCGCTGGTGAGGGCGTCACCTTGACAGTTTCCACCTACAAGAATCCTCATATTTTGAAGTACACTACTGAAAGTGATGAAGGGGATCACAACTACAGCAACAACAATGATAAATGA 663 0.5128 MSNNPTPSSYSDSVSSEDHHIGSSSQRSPPAAAATSTNQQVTTPSSRKPRGRPLGSKNKSRSIPLPVSLPTEPFVNVLVVNVDPNRDIMECILDIAHQGQVSLSVLSAFGTINSVTLRNSTHGAPYLVLHGPFKLVSLTGSYLYNNHYTLHLGATPPSPLSFGINFSTTTGEIFTGVIGGRVVAGEGVTLTVSTYKNPHILKYTTESDEGDHNYSNNNDK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0073 220 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 11 214 - -
Pvu6g0073 220 SUPERFAMILY AF0104/ALDC/Ptd012-like 76 203 - -
Pvu6g0073 220 Pfam Plants and Prokaryotes Conserved (PCC) domain 77 194 IPR005175 -
Pvu6g0073 220 Gene3D - 74 213 - -
Pvu6g0073 220 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 214 IPR014476 GO:0003680
Pvu6g0073 220 MobiDBLite consensus disorder prediction 1 65 - -
Pvu6g0073 220 MobiDBLite consensus disorder prediction 1 49 - -
Pvu6g0073 220 CDD DUF296 76 185 IPR005175 -
Pvu6g0073 220 ProSiteProfiles PPC domain profile profile. 71 218 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0073 Pvu-Chr6 3602717 3603379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0073 47 209 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 27.879 1.12e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0073 - - vra:106779930 315.849