Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1887 ATGGATAAAGTGGGGTGGGGTTTCAAGAGCTTCAGAACATTTTTGGTTGTGGCTTCTATAACCCTTCCTATTTTAATCACATTTACTCTCATACACCAAACCTCAGTTTTTGATCTCGTCCAAGGATTTAACGTTTTGGCTGCAAGAGCTCACAATGCTTCTAATGTTGTCTTGAAACAAGGAACTCAAAATGCTACCACTACTAATGTCCTACAAGAAGAAGCTCAAAATGCCTTAAAACAAGGGCTTCAAAATGCTACAGTTAAAACTGGGGAAAAGGATCATAATATTGTTGCAGACTCAGCTCCTGTTGATAAGGTGTTGGGAAGCAAAAATCAGAATGCTACGCCTGGGATCTTAGAAGAACCAGCTCAGACACTACCTCTCTTAGATATTGGGCCAAAGAATAATTCATTTGAAGATGGGGAGAATGTTTTGTCCCTATCTACTGCCACCATTTCTAAAGACAAACTCCTTGATGGGCTTCTGGTTTCATCATTTGATGAAGCATCATGCTTTAGTAGATATCGATCTTACTTGTACCGCAAAAGTTCCCCTCACAAACCTTCTAAATATCTGATTTCCAAGCTACGAAAGTATGAACATCTTCATCGAAGTTGTGGACCTTCTACCAAATTCTACAACAAAATCATGAGAAAGGGCACAAAGTTTAGCAAAAGTGATGTTAGTACAAAGTGCAAATATCTTGTTTGGACAGCTGCAAATGGATTAGGGAACAGGATAGTAACCTTGGTTGCAGCATTTCTTTATGCTATCCTTACAGATCGTGTTCTGCTTGTCAAATTTGGGGCCGATATGTTTGGTCTTTTTTGTGAGCCATTTCCTGATTCCTCGTGGTTATTGCCCAGGAGTTTTCCTTATTGGAGAGATCAGAAACATATTGAAACATATGAAAACATATTAAATAGTTACAAGGTAAACAGTTCACAGGTACTTTTGCCACCATTTCTTATTCTTAATCTACAGCACACCCATGACCATCACAATAATTTTTTTCATTGTGATCCAAGTCAAGATCTTCTTCGAAAAATTTCCGTGCTGATTTTACGGTCAGATCAATACTTTGTTCCTTCCCTTTTTATGATTCCATCATTTAGTGAAGGTCTAAGTAAAATGTTCCCTGAGAAAGACACTGTTTTTCACCATCTTGGACGTTACCTTCTTCACCCATCAAATGAAGCATGGGAAATTATTAGAAAATTCTATGAGGCGCATCTAGCCAAGGCAAATGAGAGGATTGGCCTGCAGATTAGGCTTTTTAATACTCATCGACCTCCACATCAAACTGTTATTAATGAAATAGTATCATGCACCCTTCAGCATAAGTTGCTGCCTGATTTCAAGTTCAACACACAAAAGTTAGTAACTTCTCCTTTGAAGAAGACCTCAAAAGCTGTTTTAGTGGCATCTTTATTCTCAGAATACGGGGAGAAGCTGAAGACTATGTATCAGGCAAATAGAACTGTGACCAGGGAGGTAATAAGAGTTTATCAGCCCAGTCATGAAGAGCGTCAAAAGTCAAATGATGACATGCACAACATTAAGGCATGGACCGAAATATATTTGCTGAGTTTGTGTGATGCATTGGTTACAAGCCCGAAATCTACTTTTGGTTATGTTGCTCATAGTCTTGGAGGTTTGAAGCCATGGATTTTGCGGAGGGCATATAATGAAACCGTCCCAGATCCACCTTGTCGACAAGCCAAGTCCATGGAGCCTTGTTTCCATTACCCTCCCAAAAATGATTGTAGGGCCAATAGCACAGTAGATTTTACTTCCCTTTTTCATCATATGAAGCATTGTGAAGATGTATCTGGTGGATTGAAGCTGGTTAATGGTAATCACTAG 1869 0.3911 MDKVGWGFKSFRTFLVVASITLPILITFTLIHQTSVFDLVQGFNVLAARAHNASNVVLKQGTQNATTTNVLQEEAQNALKQGLQNATVKTGEKDHNIVADSAPVDKVLGSKNQNATPGILEEPAQTLPLLDIGPKNNSFEDGENVLSLSTATISKDKLLDGLLVSSFDEASCFSRYRSYLYRKSSPHKPSKYLISKLRKYEHLHRSCGPSTKFYNKIMRKGTKFSKSDVSTKCKYLVWTAANGLGNRIVTLVAAFLYAILTDRVLLVKFGADMFGLFCEPFPDSSWLLPRSFPYWRDQKHIETYENILNSYKVNSSQVLLPPFLILNLQHTHDHHNNFFHCDPSQDLLRKISVLILRSDQYFVPSLFMIPSFSEGLSKMFPEKDTVFHHLGRYLLHPSNEAWEIIRKFYEAHLAKANERIGLQIRLFNTHRPPHQTVINEIVSCTLQHKLLPDFKFNTQKLVTSPLKKTSKAVLVASLFSEYGEKLKTMYQANRTVTREVIRVYQPSHEERQKSNDDMHNIKAWTEIYLLSLCDALVTSPKSTFGYVAHSLGGLKPWILRRAYNETVPDPPCRQAKSMEPCFHYPPKNDCRANSTVDFTSLFHHMKHCEDVSGGLKLVNGNH* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1887 622 PANTHER FUCOSYLTRANSFERASE 2-RELATED 8 621 IPR004938 GO:0008107|GO:0016020|GO:0042546
Pvu5g1887 622 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 8 621 - -
Pvu5g1887 622 Gene3D - 230 283 - -
Pvu5g1887 622 Gene3D - 402 560 - -
Pvu5g1887 622 Pfam Xyloglucan fucosyltransferase 151 591 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1887 Pvu-Chr5 40389341 40392932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1887 153 618 Xyloglucan Fucosyltransferase1 AT2G03220 50.740 1.82e-161 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1887 K13681 - gmx:100799776 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1887 5 40389341 40392932 Pvu10g1682 10 42976286 42977692 PCT