Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1548 ATGGCCGACATGGAAGAAATTGGACCTGATGTCTGTTCGGATCTGGAAGTTGATGATATTAGATGCCCCAATATAGCAGAGAAAGATGTCAGTGATGAAGAGATTGAAGCAGAGGAACTGGAACGGCGGATGTGGAAGGATCGAATCAAACTCAAAAGGCTAAAGGAAAGACAGAAGCTGGCGATTCAGCAAGCTGCAGAGAAGCAAAAGCCAAGGCAGTCCAGTGATCAAGCTCGTAGGAAGAAAATGTCCAGAGCACAGGATGGGATTCTGAAGTATATGCTGAAGCTTATGGAAGTCTGCAAAGCTCGTGGATTTGTGTATGGGATCATTCCTGAGAAGGGAAAGCCAGTTAGTGGTTCCTCGGATAACATTAGAGCTTGGTGGAAGGAGAAGGTAAAGTTTGATAAGAATGGCCCTGCAGCTATAGCCAAGTATGAAGCTGAGTGTCTTGCCATGAGTGAGGCCGATAACAGCCGAAATGGCAACTCGCAGAGCATTCTCCAAGACCTGCAAGATGCAACACTTGGATCACTCTTGTCTTCTTTGATGCAACATTGTGATCCTCCCCAGAGGAAGTATCCATTGGAAAAGGGTGTACCCCCACCTTGGTGGCCAACTGGTAATGAAGATTGGTGGTCACAGTTGAATTTACCTCATGGTCAGAGTCCTCCTTATAAGAAGCCGCATGATTTGAAGAAGATGTGGAAAGTGGGGGTGCTTACTGCTGTTATAAAGCACATGTCGCCTAATATTGCAAAGATAAGGAGGCATGTCCGCCAGTCAAAATGTTTGCAGGACAAGATGACAGCAAAGGAAAGTGCAATTTGGTTGGCGGTATTAAGCCGAGAAGAAGCTCTCATTAGGCAGCCTAGTAGTGACAACGGTACATCTGGAATAACTGGAATGCTACCTGGTGTTCCTGCTGAGAATAAGCAAGCTGCTAGTAGTGCAAGCAACTATGATGTTGATGGTACTGATGATGGCATTGGTTCTGTTTCGTCTAAAGCGGATCGGAGAATTCAGAGTATGGATACCGAACCATCAGATAACTTGCACAGGGTTACGAAGTCTGTCCAAGATAAAGATCAACCTAAGCGACCCAGGCCGAAAAAACCTCGTTTGAATTCAAGGGCTGTTGACAAACCACCAGCACAATCTGACAATGAAATTTTACATGTTGAGCCAAGAGGCAAAGGACTCAATATTAACCAGACAGAAGCACAAGCAGTTCGAATCCAGATCCATGGAAATGAACAGTCCAATGAGACAGATTCTGCTGCAAGGCCACTGGAAAAGGAGCTTGAGGTGCCTACGCAACTGCTGGCACCCGAGTTTGATCATTACTCTTATTTGCATACAAACAACTTAATTTCCTCGGAAAGTATTTATACGAGTGGAAGGCCAATACAGTATCCTGAGTTGCAAAACCCTGACATGCATCATGAAACCACTTATAATCTTTATAATCCAGCAGCAGGGCATGAGCCTGGTCATTATAGGCAGCAGCTACATCCTGGGAACAGCAGTGAAGCAAGGCCAGATATTGATGCAGTTCATGCACAAGCTGTGCATATGAAAGGGGATGAAATTACTGGAGGAGATTTGCAATATTTTGGTAAAGATGCATTTCAGAATGAGCTTGATAGACCTATTGATCACTCTTTCTTTGGATCACCGCTTAGTAGCATGTCATTAGATTTTGGAGGACTTAACAGTCCATTCCATTTAGATGATTTCTTGGGTGACGATGAAATGATACAGTACTTTGGAGCATAA 1779 0.4435 MADMEEIGPDVCSDLEVDDIRCPNIAEKDVSDEEIEAEELERRMWKDRIKLKRLKERQKLAIQQAAEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMSEADNSRNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWSQLNLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLAVLSREEALIRQPSSDNGTSGITGMLPGVPAENKQAASSASNYDVDGTDDGIGSVSSKADRRIQSMDTEPSDNLHRVTKSVQDKDQPKRPRPKKPRLNSRAVDKPPAQSDNEILHVEPRGKGLNINQTEAQAVRIQIHGNEQSNETDSAARPLEKELEVPTQLLAPEFDHYSYLHTNNLISSESIYTSGRPIQYPELQNPDMHHETTYNLYNPAAGHEPGHYRQQLHPGNSSEARPDIDAVHAQAVHMKGDEITGGDLQYFGKDAFQNELDRPIDHSFFGSPLSSMSLDFGGLNSPFHLDDFLGDDEMIQYFGA* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1548 592 Gene3D - 72 148 IPR023278 GO:0003700|GO:0005634
Pvu5g1548 592 Gene3D - 157 296 IPR023278 GO:0003700|GO:0005634
Pvu5g1548 592 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 11 590 IPR006957 GO:0005634
Pvu5g1548 592 Coils Coil 37 57 - -
Pvu5g1548 592 Pfam Ethylene insensitive 3 38 285 IPR006957 GO:0005634
Pvu5g1548 592 SUPERFAMILY DNA-binding domain of EIN3-like 166 289 IPR023278 GO:0003700|GO:0005634
Pvu5g1548 592 MobiDBLite consensus disorder prediction 340 378 - -
Pvu5g1548 592 MobiDBLite consensus disorder prediction 289 403 - -
Pvu5g1548 592 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 11 590 - -
Pvu5g1548 592 MobiDBLite consensus disorder prediction 61 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1548 Pvu-Chr5 37737594 37741112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1548 16 575 EIL Transcription Factor Family AT1G73730 54.196 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Pvu5g1548 EIN3 3.1e-127 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1548 5 37737594 37741112 Pvu5g1548 5 37737594 37741112 ECH