Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1521 ATGGCTGAGAAAGAGACTATGTATTCATTAGGTGATTGGACGAGAATACCAATTTGTACTTTCTTTAAGGATGCAAGACTGGTTTTTAAAGCAGACAATCTTGGTCGGGAAATTTTGTCAATTGCATTGCCTGCAGCAATGGCTTTGACGGCTGATCCTATTGCTTCATTGGTTGACACAGCGTTTATTGGCCAAATAGGTCCAGTAGAGCTTGCTGCTGTAGGAGTTTCAATAGCTCTCTTCAATCAAGTATCAAGGATTGCAATATTCCCTCTTGTCAGTGTCACCACCTCTTTTGTGGCTGAGGAAGATACCCTTAGTGGAGCAAGCCCTCAGATAGAGGAGGGTAAATGCTTGGAAGCAGGTCCACCTATGGATACTGAAACCAAAGAGTTATTACCACAGAAAGGTGGAAATGTGCACAATTCAGATTTTGTTTGTGAATCTATTAATATAGTTCAGGAGGAACACAAGAAAAGGCATATCCCTTCAGCTTCAGCGGCATTATTTATTGGTGGTGTTCTTGGCCTCATCCAAGCAATATTTCTTATATCTGCGGCAAAACCTTTATTGAATTTCATGGGAGTAACTTCTGACTCTCCTATGCTACACCCTGCACAGCAGTATCTGAGATTGAGGTCCCTCGGTGCTCCTGCCGTTCTTCTTTCCTTGGCAATGCAAGGAGTTTTCCGAGGATTTAAAGACACAAAAACACCTTTATATGCTACTGTGGCAGGAGATGTAACTAACATAGCATTGGATCCTTTATTCATGTTTGTATTCGGCTACGGTGTCAGTGGTGCAGCCATTGCACACGTTATATCTCAGTACCTAATTTCAGGTATACTCCTGTGGAGGTTGTTGGAACAAGTTGACCTTATACCTCCAAGCTTAAAGCATCTGCAATTAGAACGTTTTCTTAAAAATGGTTTTCTATTATTGATGAGAGTCATCGCTGTAACATTCTGTGTGACACTGGCTGCATCATTAGCTGCACGGCAAGGATCAACATCCATGGCTGCATTTCAAGTCTGTCTGCAGGTTTGGTTGGCAGTTTCTCTTCTTGCCGATGGTCTGGCCGTTGCTGGGCAGGCTATTCTTGCTGGTGCATTTGCTAATAAGGACTTCAACAGGGCATCGGCAACCGCATCCCGAGTTCTGCAGATGGGTTTGGTTCTAGGATTGGTACTTGCATTCATTCTCGGAACAGGTTTGCACTTTGGTGCTAGAATATTTACAAAAGATGCTGAAGTTCTCCGCCTCATTCAAATTGGGATCCCGTTTGTGGCAGTCACTCAACCCTTGAATTCTTTAGCATTTGTATTTGATGGTGTCAACTTTGGAGCTTCTGATTTTGCATATTCAGCCTTCTCCATGGTTGTGGTGGCAGTTCTAAGCATCATTTGTCTGCTTATTTTGTCGTCCACTGGTGGTTTCATTGGTATTTGGGTTGCTTTGACCATCTATATGGGTCTTAGGGCATTTGCTGGCTTCTTGAGGATTGGAACAGGATCAGGACCTTGGGAGTTCCTGAGGAGCTCATAA 1545 0.4337 MAEKETMYSLGDWTRIPICTFFKDARLVFKADNLGREILSIALPAAMALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSVTTSFVAEEDTLSGASPQIEEGKCLEAGPPMDTETKELLPQKGGNVHNSDFVCESINIVQEEHKKRHIPSASAALFIGGVLGLIQAIFLISAAKPLLNFMGVTSDSPMLHPAQQYLRLRSLGAPAVLLSLAMQGVFRGFKDTKTPLYATVAGDVTNIALDPLFMFVFGYGVSGAAIAHVISQYLISGILLWRLLEQVDLIPPSLKHLQLERFLKNGFLLLMRVIAVTFCVTLAASLAARQGSTSMAAFQVCLQVWLAVSLLADGLAVAGQAILAGAFANKDFNRASATASRVLQMGLVLGLVLAFILGTGLHFGARIFTKDAEVLRLIQIGIPFVAVTQPLNSLAFVFDGVNFGASDFAYSAFSMVVVAVLSIICLLILSSTGGFIGIWVALTIYMGLRAFAGFLRIGTGSGPWEFLRSS* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1521 514 CDD MATE_DinF_like 34 503 IPR044644 -
Pvu5g1521 514 TIGRFAM matE: MATE efflux family protein 44 483 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu5g1521 514 Pfam MatE 315 468 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu5g1521 514 Pfam MatE 164 256 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu5g1521 514 PANTHER PROTEIN DETOXIFICATION 11 512 - -
Pvu5g1521 514 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 11 512 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1521 Pvu-Chr5 37505124 37509928 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1521 5 37505124 37509928 Pvu11g2204 11 49589348 49599784 ECH
Pvu5g1521 5 37505124 37509928 Pvu5g1521 5 37505124 37509928 ECH
Pvu7g2623 7 49301425 49306865 Pvu5g1521 5 37505124 37509928 ECH
Pvu5g1521 5 37505124 37509928 Pvu11g0617 11 5222769 5227010 PCT