Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1497 ATGGATAGAAGAGTCTCCTCCACAATGAATATTGCTAATGATGAAGAAGAGTCTTGCTTTGATGAGGGTGATGTCTCTGCTGTCCTTGACTACATAAAGCAAATGCTGATGGAAGAGGACACAGAAGAAAAGTACAGTATGTTCCATGATTCCTTGGCTCTTCAATATACAGAGAGATCATTTTATGAGGTTATCACTCACCACAACCCTTCTTCCTCCTCCTCCTCTTCCGCACACCATCATGCTCACAGTTGCACCAGTTCTAGTGAGGAGAGCTCTGAGCAAAATGTCTCTGGTAGCTCCTCTGATAATAGTACTGGTAGTAGCACTGATAACAGTACTTCCATCTCTGCTGAGTCTCAGTGGAGAAGCGTTGACCACAACACCCCGGCACTGCCAAACACTTTTACCTTTCCAGATAACTTTGTTTTCCCCTCAAATTCGACCTCCACCACTCAATCTTCCATGAATACTGTATTTGGATTCTTAGATAATTCCCTTCTTGATTCTGCTTTTCAAGAGCATTTCAAGAGGGGTCTAGAGCAAGGTACCAGGTTCCTTCCTAAACATACTCCATTCATTGTTGACACGGACAGCACGGCCTTTTCCCCTTCTTTCACAATGGTTCCAAGTGTTGTAGTTAAGACAGAACCAGAAGAAAGTGTTGAAGGGGACCATTTTCTGTCTGTGTCAAGAAGGAGAAATCGGGATGAGGAAGAGTATGAAGCAGATGGGAGAATCACGAAGACTTCAGCAGCATACGTGGATGAGAGTGAGCTATCTGAGTTGCTTGATAAAGTGGTGCTAGGCACTGGATTAGGAAAAGGGGTTCCTCCAGACACAGCCCTTTACCAAAACGATGAAACATTATTAACAAACATGTTTGGTAGGGAGGTGAGGAAAAGTGGCGAGGAAGTTGTGGATCTGAGGACACTATTGATACATTGTGCACAAGCTGTTGCTTCTGATAGTCCTTCATTTGCAAAGCAACTAGTAAAGCAGATTAAGCAGCATTCTTCTCCAACAGGGGATACTGCTCAAAGGCTTGCACATTACTTTGGAAATGCCCTTGAAGCATGCTTGGATGGAACCGGTTTCCACGTTTATAGTGTTGCATCCTCCAAAAGAATCTCTGCCAAAGACATGATAAAAGCTTACCATGTATATGCTTCAGTGTGCCCGTTTGAAATGATTGCAATCATGTTTGCCAACAAATCAATTTATAGTCTTGCTGAGAATGCAAAAACAATTCATATCATAGACTTTGGTATCCGCTATGGCTTCAAATGGCCTTCACTTATCAGCGAGATTTCAAGACGTCCAGGTGGACCACCCAAGCTACGCTTCACGGGGATAGATCAGCCACAGCCAGGTTTCAGGCCAGAGGAGAGGGTGCTGGAGACGGGGCGTAGACTTGAAAATTATTGCAAGCGTTTCAATGTTCCCTTTGAGTTCAATGCTATTGCAAGAAAATGGGACACTATCAGAATTGAGGACCTCAAGATAGAGAAAAACGAATTTGTAGCTGTGAACTGCATGTTTCAGTTGGAGCGTCTACTTGACGAGTCTGTGGTGTTGGACAATCCAAGGGATGGTGTTTTGAGGTTGATTAAGAAGGCAAATCCTGACATATTTGTGCACAGCATTGTGAACGGCTCCCATGATGTTCCATTCTTTGTGTCACGGTTCAGAGAGGCTCTCTTTCACTACTCTGCAGTGTTTGATATGCTAGACAGCAACCTTGATCGTGAAGATCCCAGCAGGTTGATGTTTGAGAAGGAGTTGTTTGGACAGGAGATCATGAACATCATAGCTTGTGAAGGTTGTGAGAGGGTGGAGAGGCCACAAACATACAAGCAATGGCAGCTTCATAACATGAGAATTGGATTTCGGTTGCTTCCTTTGAATCAAAAAGTCATTGACAAATTAAAGAAAAGGTGGAGAGATGATGCATACAACACGAATTTCATGCTTGAGGTGGATGGTGATTGGGTGCTACAAGGTTGGAAGGGTCGAATTCTACATGCTTCTTCTTGTTGGATTCCTGCATAG 2052 0.4366 MDRRVSSTMNIANDEEESCFDEGDVSAVLDYIKQMLMEEDTEEKYSMFHDSLALQYTERSFYEVITHHNPSSSSSSSAHHHAHSCTSSSEESSEQNVSGSSSDNSTGSSTDNSTSISAESQWRSVDHNTPALPNTFTFPDNFVFPSNSTSTTQSSMNTVFGFLDNSLLDSAFQEHFKRGLEQGTRFLPKHTPFIVDTDSTAFSPSFTMVPSVVVKTEPEESVEGDHFLSVSRRRNRDEEEYEADGRITKTSAAYVDESELSELLDKVVLGTGLGKGVPPDTALYQNDETLLTNMFGREVRKSGEEVVDLRTLLIHCAQAVASDSPSFAKQLVKQIKQHSSPTGDTAQRLAHYFGNALEACLDGTGFHVYSVASSKRISAKDMIKAYHVYASVCPFEMIAIMFANKSIYSLAENAKTIHIIDFGIRYGFKWPSLISEISRRPGGPPKLRFTGIDQPQPGFRPEERVLETGRRLENYCKRFNVPFEFNAIARKWDTIRIEDLKIEKNEFVAVNCMFQLERLLDESVVLDNPRDGVLRLIKKANPDIFVHSIVNGSHDVPFFVSRFREALFHYSAVFDMLDSNLDREDPSRLMFEKELFGQEIMNIIACEGCERVERPQTYKQWQLHNMRIGFRLLPLNQKVIDKLKKRWRDDAYNTNFMLEVDGDWVLQGWKGRILHASSCWIPA* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1497 683 MobiDBLite consensus disorder prediction 67 128 - -
Pvu5g1497 683 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 682 IPR005202 -
Pvu5g1497 683 Pfam GRAS domain family 309 680 IPR005202 -
Pvu5g1497 683 ProSiteProfiles GRAS family profile. 300 681 IPR005202 -
Pvu5g1497 683 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 17 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1497 Pvu-Chr5 37349336 37351708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1497 28 683 GRAS Transcription Factor Family AT1G07530 47.475 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu5g1497 GRAS 9.7e-108 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1497 5 37349336 37351708 Pvu5g1497 5 37349336 37351708 ECH
Pvu5g1497 5 37349336 37351708 Pvu11g0650 11 5483354 5486607 PCT
Pvu11g0649 11 5479282 5481988 Pvu5g1497 5 37349336 37351708 PCT