Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0818 GATCTCACTCGGAATTATTTTAATGGCTCAATTCCAAAAGCCCTTGGACGCCTCTCATCAGTTGTAGTTCTGTCACTTCTCGGAAACCGACTTACTGGTTCAATTCCTTCAGAAATTAGTGATATGACTAGTCTGCAAGAACTGAACTTGGAAGATAATCAACTTGAAGGACATCTTCCCCCAAGCCTTGGAAAAATGAGCAATTTGCTGAGATTACTTCTCTCCGCAAATAATTTCACAGGGACGATACCAGAAGCATATGGAAAACTAAAGAATCTCACTCAGTTTAGGATAGATGGGAGCACTTTGTCTGGGAAGATACCCAGTTTTATTGGGAACTGGACCAAACTTGATAGACTGGATTTGCAGGGCACATCCTTGGAAGGTCCAATTCCTTCTGTCATATCTGAATTGATCTATTTGACAGAACTGAGAATATCTGATTTGAAGGGACCAACCATGACATTTCCTAATCTGACGAATATGAAACTCTTGCAAAGACTAGAATTGAGAAATTGCTTAATTACTGGTCAAATTCCTAGTTACATTGGAGAAATGCAAAGTTTAAAAACTCTAGATCTGAGCTCCAACATGCTGACTGGTCCAATCCCAGATTCGTTACAGGACATGGAAAAAATAAATTACTTGTTTCTAACTAACAATTCTCTAAGTGGACGAATTCCTGATTGGATACAAGACTTCAAACAGAACATTGATTTATCTTTGAACAATTTTAGTGAGAGTTTTTCAAATGGTTGCCAGATCTTGGATGTGAACTTAGCTTCAAGCCTCACGCCCTCAGCAAACACTTCATCGTCTTGTTTGAAGATGGGCCAACCTTGTTCTGGAAAACCCCGGTCTCATTCACTGTTCATAAACTGTGGAGGACCTGAAATAGAGTTTGAGGGCAATGAATATAAAGCCGACCTCAGTCTACGAGGCATATCAAACTATGTTCTTAGTGATGATGGCAAATGGGCATATAGCAGCACTGGAGTATATCTAGGAAGGGATAAGGCTGATTATGTAGCAAAAAATCAGTTTAATCTGATTATTAATGGCTCTGAATACTACCAAACAGCCCGCATGGCCCCACTATATCTTAATTATTATGGTCTTTGTATGCTGAATGGCAATTATAAAGTGAAACTTCATTTTGCTGAGATAACATTCTCTGATGACAATGCATTTACCAGCCTTGGAAAGCGTGTCTTTGATGTTTCAATCCAAGGTTTTAAATATTTGAAAGATTTTAACATTGTGAAAGAAGCTGGTGGAGTTGGTAAGGGAATCACCAGGGAGTTTAATGTGAATGTTACCCACAACACCTTGGAAATCCACTTCTCCTGGGCAGGTAAAGGAACTAATGCTATTCCAGTAAGAGGTATATATGGACCTCTTATATCCGCGATCACTGTGACCCCAAACTTTAAAGTTCCTTCATATGGGCTGTCTACTGGAGCAATTGCTGGAATTGTGGTTGGGATATGTGTGTTCATCATATTGATACTCCTTGCACTTTGGAAGATGGGTTTCCTATGTGGGAAAGATGAAACCGACCAAGAACTTATAGGTTTGAAGACAGGTTATTTCAGTTTAAGACAGATTAAAGCTGCTACTAAGAACTTCGATCCAGCAAATAAGATAGGTGAAGGAGGCTTTGGACCAGTATACAAGGGTGTACTGTCAGACGGTGCTGTGATTGCTGTTAAGCAGCTTTCCTCCAAATCAAAGCAAGGGAATCGCGAATTCATCAATGAAATAGGCATGATATCTGCTTTGCAGCATCCAAATCTTGTGAAACTTTATGGCTGTTGCATTGAAGGGAACCAGTTGCTTCTAGTATATGAATATATGGAGAACAATAGTCTTGCTCGTGCACTTTTTGGTAAAGAACACGAGAGAATGCAATTGGACTGGCCCAGAAGAATGAAGATTTGTGTGGGGATTGCAAAGGGATTAGCCTATCTCCATGAGGAGTCAAGGTTGAAAATAGTACACAGAGATATTAAAGCAACCAATGTCTTGCTTGATAAGCATATGAAAGCCAAGATCTCTGACTTTGGTTTAGCCAAACTTGATGAAGAAGAGAATACCCATATTAGTACAAGAATAGCTGGGACAATTGGTTACATGGCTCCTGAGTATGCTATGCGGGGTTACTTGACTGACAAAGCAGATGTCTATAGCTTTGGTGTTGTAGCTTTAGAGATTGTTAGTGGAAAGAGCAACACAAATTACAGGCCAAAGGAGGAGTTTGTGTATCTTTTGGATTGGGCCTATGTTCTCCAAGAGCAAGGAAACCTTCTGGATTTGGTGGATCCAAGTCTTGGTTCAAAGTACTCCTCAGAAGAGGCCATGAGAATGCTGCAGTTAGCACTCTTGTGCACCAATCCTTCTCCCACTCTTAGACCGCCTATGTCATCGGTAGTGAGCATGCTTGAGGGAAAAAGTCCAATTCAACCACCACCAATAATCAAAGGCAGTGACTATGCACAAGATGCGAGATTTAAATCTTTTGAGTTGCTATCACAAGACAGCCAAACTCATGTCTCTTCTGCTTTCTCACAAGATAGCATGGAGCAAAGAAGCAAGTCAATGGGGGGACCATGGGCTGAAATGCCTCCATTTGATAGCAAGAAAGGTCGAATATGA 2655 0.4056 DLTRNYFNGSIPKALGRLSSVVVLSLLGNRLTGSIPSEISDMTSLQELNLEDNQLEGHLPPSLGKMSNLLRLLLSANNFTGTIPEAYGKLKNLTQFRIDGSTLSGKIPSFIGNWTKLDRLDLQGTSLEGPIPSVISELIYLTELRISDLKGPTMTFPNLTNMKLLQRLELRNCLITGQIPSYIGEMQSLKTLDLSSNMLTGPIPDSLQDMEKINYLFLTNNSLSGRIPDWIQDFKQNIDLSLNNFSESFSNGCQILDVNLASSLTPSANTSSSCLKMGQPCSGKPRSHSLFINCGGPEIEFEGNEYKADLSLRGISNYVLSDDGKWAYSSTGVYLGRDKADYVAKNQFNLIINGSEYYQTARMAPLYLNYYGLCMLNGNYKVKLHFAEITFSDDNAFTSLGKRVFDVSIQGFKYLKDFNIVKEAGGVGKGITREFNVNVTHNTLEIHFSWAGKGTNAIPVRGIYGPLISAITVTPNFKVPSYGLSTGAIAGIVVGICVFIILILLALWKMGFLCGKDETDQELIGLKTGYFSLRQIKAATKNFDPANKIGEGGFGPVYKGVLSDGAVIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYMENNSLARALFGKEHERMQLDWPRRMKICVGIAKGLAYLHEESRLKIVHRDIKATNVLLDKHMKAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLDLVDPSLGSKYSSEEAMRMLQLALLCTNPSPTLRPPMSSVVSMLEGKSPIQPPPIIKGSDYAQDARFKSFELLSQDSQTHVSSAFSQDSMEQRSKSMGGPWAEMPPFDSKKGRI* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0818 884 PANTHER - 261 872 - -
Pvu5g0818 884 PANTHER - 1 176 - -
Pvu5g0818 884 PANTHER - 175 233 - -
Pvu5g0818 884 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 261 872 - -
Pvu5g0818 884 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 176 - -
Pvu5g0818 884 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 175 233 - -
Pvu5g0818 884 CDD STKc_IRAK 549 816 - -
Pvu5g0818 884 Pfam Leucine rich repeat 165 223 IPR001611 GO:0005515
Pvu5g0818 884 ProSitePatterns Serine/Threonine protein kinases active-site signature. 665 677 IPR008271 GO:0004672|GO:0006468
Pvu5g0818 884 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 64 94 IPR000225 GO:0005515
Pvu5g0818 884 SUPERFAMILY Protein kinase-like (PK-like) 527 815 IPR011009 -
Pvu5g0818 884 SUPERFAMILY L domain-like 1 243 - -
Pvu5g0818 884 Pfam Leucine Rich Repeat 44 65 IPR001611 GO:0005515
Pvu5g0818 884 Pfam Protein tyrosine and serine/threonine kinase 547 812 IPR001245 GO:0004672|GO:0006468
Pvu5g0818 884 Gene3D - 287 476 - -
Pvu5g0818 884 Pfam Malectin domain 290 471 IPR021720 -
Pvu5g0818 884 Gene3D Transferase(Phosphotransferase) domain 1 619 821 - -
Pvu5g0818 884 MobiDBLite consensus disorder prediction 851 884 - -
Pvu5g0818 884 Gene3D Ribonuclease Inhibitor 1 270 IPR032675 -
Pvu5g0818 884 Gene3D Phosphorylase Kinase; domain 1 513 618 - -
Pvu5g0818 884 ProSiteProfiles Protein kinase domain profile. 543 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0818 884 SMART serkin_6 543 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0818 Pvu-Chr5 17182836 17189337 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0818 1 873 Receptor kinase-like Gene Family AT1G53440 62.783 0.0 1103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0818 PK_Tyr_Ser-Thr 1.4e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0818 5 17182836 17189337 Pvu11g1757 11 43982318 43999989 PCT
Pvu11g1780 11 44314463 44323283 Pvu5g0818 5 17182836 17189337 PCT