Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0814 CTAAAAGGTTTGGAAGAACGAACAAGTTTATTCACTTTAAGACAAATAAAAGTAGCAACTAACAACTTTGATGAGGTGAAAAAGATTGGTGAAGGAGGATTTGGTCCTGTGTATAAGGGATGTCTATCAGATGGGACATTAATAGCAGTAAAGCTACTCTCTTCTAAATCAAGACAAGGGAATCGTGAGTTCTTAAATGAGATAGGAATGATTTCTGCTTTGCAACATCCTTATCTTGTTAAACTCTATGGATGTTGTGTAGAAGGAGATCAACTATTGTTGATATATGAATATATGGAAAATAATAGCCTTGCTCGAGCTTTATTTGGTCCTGAAGAATTCCAAATAAAATTGGATTGGCCAACAAGGTACAAGATTTGTGTTGGTATTGCTGGAGGTTTGGCATACCTTCATGAAGAATCACGATTGAAGGTTGTTCACAGGGACATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTCAACCCAAAAATATCTGACTTTGGTTTGGCAAAGCTTGATGATCAGGAAAACACTCATATTAGCACCCGAATAGCTGGAACATATGGATATATGGCTCCAGAATATGCCATGCATGGTTATTTAACTGATAAAGCAGATGTCTATAGCTTTGGAATTGTTGTCTTGGAAATTGCATGCTTTGAAATTGTTGTCTTGGAAATTGTAAATGGAAATAACAATATCATTCACCGACCAAAAGAAGAATCATTCTCAATTCTTGATTGGGCACATCTATTGAAACAAAAAGGTGATCTAATGGACCTAGTGGATAGAAGATTGGGTTCAGAGTTCAATAAAGAAGAAGCATTGGTAGTGATAAAAGTGGCTCTGTTATGCACTCAGGTGACTACAACACTTAGGCCAACAATGTCAGCAGTAGTAAGCATGCTAGAAGGAAGAAGTGTTGTTGAGGAAGTGGTTACAGAGACAAGTGAGGTATTGGATGAGAAGAGGATGGAGGCAATGAGACAATATTATCATGAGCTAAGTATAGAAGTGCCATGGACTGCTTCATCTACATCTGCATCAGATCTTTATCCAACACACCTTGATTCATCTTATTTGGACAAGAGAAATTAG 1101 0.3724 LKGLEERTSLFTLRQIKVATNNFDEVKKIGEGGFGPVYKGCLSDGTLIAVKLLSSKSRQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEYMENNSLARALFGPEEFQIKLDWPTRYKICVGIAGGLAYLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDDQENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVVLEIACFEIVVLEIVNGNNNIIHRPKEESFSILDWAHLLKQKGDLMDLVDRRLGSEFNKEEALVVIKVALLCTQVTTTLRPTMSAVVSMLEGRSVVEEVVTETSEVLDEKRMEAMRQYYHELSIEVPWTASSTSASDLYPTHLDSSYLDKRN* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0814 366 Pfam Protein kinase domain 24 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0814 366 Gene3D Phosphorylase Kinase; domain 1 2 98 - -
Pvu5g0814 366 ProSiteProfiles Protein kinase domain profile. 23 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0814 366 SUPERFAMILY Protein kinase-like (PK-like) 8 306 IPR011009 -
Pvu5g0814 366 SMART serkin_6 23 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0814 366 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 322 - -
Pvu5g0814 366 CDD STKc_IRAK 29 306 - -
Pvu5g0814 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Pvu5g0814 366 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 2 322 - -
Pvu5g0814 366 Gene3D Transferase(Phosphotransferase) domain 1 99 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0814 Pvu-Chr5 16785347 16787168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0814 1 360 Receptor kinase-like Gene Family AT1G53420 63.187 1.30e-156 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0814 Pkinase 1.6e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1760 11 44020305 44025763 Pvu5g0814 5 16785347 16787168 PCT